DRSC/TRiP Functional Genomics Resources

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Protein Alignment BBS8 and BBS4

DIOPT Version :10

Sequence 1:NP_608524.1 Gene:BBS8 / 33217 FlyBaseID:FBgn0031255 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_610636.1 Gene:BBS4 / 36167 FlyBaseID:FBgn0033578 Length:486 Species:Drosophila melanogaster


Alignment Length:376 Identity:69/376 - (18%)
Similarity:139/376 - (36%) Gaps:109/376 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 DATSKLYQASRLNPTIYAERETLVKALF------QFL-YYHEADVQKA---HSLCQAVLEV---- 279
            :|...|.:::.|||......:.:.:.|:      |.| .:.||:.:.:   |.:...:.|:    
  Fly    85 EALRHLQKSAELNPRNIETYKEIGRTLYIMGRFSQALGVFREAEQRSSRQDHEIYHYLGELLYRA 149

  Fly   280 ---ERQKPSGSTGCTLSWWWQQQMGRCLLALHYPRRAEPFLQQSLTSFPHPDTYLLLSRVYQRIK 341
               :.||...|         |||           ..|..:.:.::.|....::|:.|:.:|::.|
  Fly   150 ATTQSQKDVAS---------QQQ-----------DEARTYFELAVQSGRKLESYVRLAELYRKDK 194

  Fly   342 QPERALLVIGEVVDSRPFDVTYRLE----QARIHQAMEQQEDALQLYRLAAKLHPINVESLASIA 402
            |.::|:.::...:...|.:....:|    ..:|::..:..:...::..:..|..|..:.:..:|.
  Fly   195 QYQKAIEILENCLHLTPENSEVLIEISVLYLKINETQKAHDRLAEVVSIERKCSPKGLLAFGAIL 259

  Fly   403 VGYFYDNNPEMALMYYRRILSLGAQSPELYCNIALCCLYGGQIDLVLPCFQRALATATQPGQKSD 467
            ..   .|:.:.||..|.:|.:...:..||:.||.||            .|::..........:..
  Fly   260 QS---RNDIDGALSKYSQIANAEPEIAELWNNIGLC------------FFKKQKFIVAISSLRKS 309

  Fly   468 IW---------YNLSFVAVTSGDF-----------NLAK---RC---LQLCL------------- 493
            :|         ||||.:.:.|..:           ||.|   .|   |.|||             
  Fly   310 VWLSPLNYNALYNLSLIYIASEQYASAFHTLAAAINLRKDNAECYMLLGLCLRKLDDMENAFVAL 374

  Fly   494 -----TSDAQNGAALN-----NLAVLAAQSGDI-LGAKSY---LNAAKDVM 530
                 .:..|.||..|     |.|:...::|.: |..:.|   ::.|:|::
  Fly   375 ERASSMATGQQGAGRNPLVVLNFALFCYETGRLALSTEQYNRFMSQAQDLL 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BBS8NP_608524.1 TTC8_N 96..215 CDD:411061
LapB 299..536 CDD:442196 52/289 (18%)
TPR repeat 299..322 CDD:276809 2/22 (9%)
TPR repeat 327..355 CDD:276809 6/27 (22%)
TPR repeat 365..389 CDD:276809 2/27 (7%)
TPR repeat 394..424 CDD:276809 6/29 (21%)
TPR repeat 429..457 CDD:276809 7/27 (26%)
TPR repeat 466..493 CDD:276809 12/52 (23%)
TPR repeat 500..526 CDD:276809 8/34 (24%)
BBS4NP_610636.1 TPR repeat 68..95 CDD:276809 2/9 (22%)
LapB 70..347 CDD:442196 51/296 (17%)
TPR repeat 100..130 CDD:276809 5/29 (17%)
TPR repeat 136..175 CDD:276809 9/58 (16%)
TPR repeat 179..209 CDD:276809 6/29 (21%)
TPR repeat 214..242 CDD:276809 2/27 (7%)
TPR repeat 249..277 CDD:276809 7/30 (23%)
BepA 281..423 CDD:443813 31/153 (20%)
TPR repeat 283..311 CDD:276809 7/39 (18%)
TPR repeat 316..346 CDD:276809 5/29 (17%)
TPR repeat 351..377 CDD:276809 5/25 (20%)
Blue background indicates that the domain is not in the aligned region.

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