DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment BBS8 and Tmtc2

DIOPT Version :10

Sequence 1:NP_608524.1 Gene:BBS8 / 33217 FlyBaseID:FBgn0031255 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_608558.1 Gene:Tmtc2 / 33276 FlyBaseID:FBgn0028481 Length:938 Species:Drosophila melanogaster


Alignment Length:660 Identity:118/660 - (17%)
Similarity:205/660 - (31%) Gaps:214/660 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 RAVSLYRRR--------------SYERCAELCNALLQAGHDG--------HVQLFTTKEEEEEEQ 57
            |..||:.||              ::..|.:|.:...:..|.|        |:|...:::...:.:
  Fly   323 RVTSLWDRRNAQSACFYSVLVGVAWGSCRQLLSGSKEVTHCGVSSTFPQYHIQKVASRKSRSKRK 387

  Fly    58 HQQQQAEHSRFGSNLQRIGPRPRGAAGGGAGAVDSGPSIMMPTWLMEGVW-QLKMRALTQRVYVD 121
            ......::..|                                   |..: |.:..||..|    
  Fly   388 RLANNTKYQAF-----------------------------------EAAYHQQQQEALPCR---- 413

  Fly   122 DLDEDDGGNEATEEVEFERIATAARPGSS---IKTAFQPRPLTSQRAQQARSRGAGVAHSSDGRL 183
                |...|.::..|.......|..|..:   :.:||:     ..|:..:.|.....:.||....
  Fly   414 ----DCNNNNSSGYVYEGSSPVAQAPAQAPHLVSSAFR-----GSRSSSSCSNSTNSSSSSSSSS 469

  Fly   184 NSSRPGSAAV-----------ARPGTSLSR------------------PGSSLGSRCG--TASRI 217
            :||...|:::           |..|.|.:.                  |.|:|....|  .|.|:
  Fly   470 SSSSSSSSSLSGGFQCSSKDYALEGMSPANRHACVLIMSLSFLALPFLPASNLLFYVGFVVAERL 534

  Fly   218 RATSAAAF--NVGDATSKLYQAS-RLNPTIYAERETLVKALFQFLYYHEADVQKAHSLCQAVLEV 279
            ....:..|  .||...|||...: |....:......|:.|:........||.:...||.::.:.:
  Fly   535 LYLPSVGFCLLVGYGVSKLMSCNQRTRNILLLSFSLLLAAMSLRTLRRNADWRDEESLYRSAIAI 599

  Fly   280 ERQKPSGSTGCTLSWWWQQQMGRCLL------------------ALH-----YPRRAEPFLQQSL 321
            ...|..|:.|..||...:.:..:.:|                  .||     ||...|.| |:::
  Fly   600 NPPKALGNLGSVLSSQGRYEEAKQVLQEAIRFRPNMADVHFNLGILHQNQQVYPAAVECF-QRAI 663

  Fly   322 TSFPH----------------------------------------------PDTYLLLSRVYQRI 340
            ...|:                                              ...||.|..:|...
  Fly   664 KFRPNLAVAYLNLGISFIALGKRQQAIEILQAGSNLDGAAVRDRTAHDQARSSAYLQLGALYVEQ 728

  Fly   341 KQPERALLVIGEVVDSRPFDVTYRLEQAR--IHQ-------AMEQQEDALQLYRLAAKLHPINVE 396
            .:.:|||.:..|.:.|.|     .|.|.|  ::|       .::|.::|.:.:|.|.:|.|..| 
  Fly   729 GKLQRALAIYREALSSLP-----GLPQQREILYQRIGDVLGRLQQWDEAERHHRAALELQPNQV- 787

  Fly   397 SLASIAVGYFYDNNPEMAL---MYYRRILSLGAQSPELYCNIA----------LCCLYGGQIDLV 448
             .|.::.|.....|...|.   |:::|.|.|..:...:|.:.|          ...:|..:...:
  Fly   788 -AAHLSYGITLARNSSRASEAEMWFKRALKLAPEQASVYHHYAEFLSLQSRHHESAIYHRRAAEL 851

  Fly   449 LP---CFQRALATATQPGQK---SDIWYNLSFVAVTSGDFNLAKRCLQLCLTSDAQNGAALNNLA 507
            .|   ....|.|||.:...:   :::||..: ||:..||.:.......:.......|.||.:..|
  Fly   852 APNDYTLVVAAATAMRLLDRKVDAEMWYRKA-VALRPGDAHAHTNLGAILHLLGRTNHAAASYKA 915

  Fly   508 VLAAQSGDIL 517
            .|..|.||.:
  Fly   916 ALRLQPGDAI 925

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BBS8NP_608524.1 TTC8_N 96..215 CDD:411061 26/153 (17%)
LapB 299..536 CDD:442196 60/316 (19%)
TPR repeat 299..322 CDD:276809 8/45 (18%)
TPR repeat 327..355 CDD:276809 8/27 (30%)
TPR repeat 365..389 CDD:276809 8/32 (25%)
TPR repeat 394..424 CDD:276809 8/32 (25%)
TPR repeat 429..457 CDD:276809 5/40 (13%)
TPR repeat 466..493 CDD:276809 6/26 (23%)
TPR repeat 500..526 CDD:276809 7/18 (39%)
Tmtc2NP_608558.1 TMTC_DUF1736 270..343 CDD:462468 5/19 (26%)
TPR 597..852 CDD:440225 46/262 (18%)
TPR repeat 602..630 CDD:276809 6/27 (22%)
TPR repeat 635..665 CDD:276809 7/30 (23%)
TPR repeat 670..694 CDD:276809 0/23 (0%)
TPR repeat 715..743 CDD:276809 8/27 (30%)
TPR repeat 748..782 CDD:276809 8/33 (24%)
TPR 780..>933 CDD:440225 33/149 (22%)
TPR repeat 787..816 CDD:276809 7/30 (23%)
TPR repeat 822..850 CDD:276809 3/27 (11%)
TPR repeat 855..885 CDD:276809 7/30 (23%)
TPR repeat 890..918 CDD:276809 4/27 (15%)

Return to query results.
Submit another query.