DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11885 and Psmg3

DIOPT Version :9

Sequence 1:NP_608522.1 Gene:CG11885 / 33215 FlyBaseID:FBgn0031253 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_001343892.1 Gene:Psmg3 / 66506 MGIID:1913756 Length:122 Species:Mus musculus


Alignment Length:136 Identity:32/136 - (23%)
Similarity:55/136 - (40%) Gaps:27/136 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NKPRQIGFDRQFSADVNGVPTEIVFHCFAKKWFLVITQLGKIPGIY-----NVHFDVKKDERVVP 65
            :||..:  .:|.:..|.||||::|...|:....:|:||.||:..:.     ||..|:.|......
Mouse     3 DKPLVV--SKQKTEVVCGVPTQVVCTAFSSHILVVVTQFGKMGTLVSLEPSNVANDISKPVLTTR 65

  Fly    66 YLHGPVDNPEFHVSVPITMNCCLGLDTDETRSAIQFLVNRTGLHKCPTEFVVGLGLKKIDGPNLR 130
            .|.|. |.|..||.               .::.:.|:....|    ....::.:.:|......|:
Mouse    66 VLLGQ-DEPLIHVF---------------AKNLVAFVSQEAG----NRAVLLAMAVKDKSMERLK 110

  Fly   131 ALAKVL 136
            ||.:|:
Mouse   111 ALKEVI 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11885NP_608522.1 PAC3 39..137 CDD:287187 22/103 (21%)
Psmg3NP_001343892.1 PAC3 34..117 CDD:313416 22/103 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4828
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR31051
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.960

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