DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11885 and psmg3

DIOPT Version :9

Sequence 1:NP_608522.1 Gene:CG11885 / 33215 FlyBaseID:FBgn0031253 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_001002529.1 Gene:psmg3 / 436802 ZFINID:ZDB-GENE-040718-262 Length:122 Species:Danio rerio


Alignment Length:114 Identity:27/114 - (23%)
Similarity:49/114 - (42%) Gaps:18/114 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PRQIGFDRQFSADVNGVPTEIVFHCFAKKWFLVITQLGKIPGIYNVHFDVKKDERVVPYLHGPV- 71
            |:.:...:|....:||..|::|...|:...|:|:||.|||..:.::..|.:..:..||.....| 
Zfish     3 PQPVIRSKQAEKTINGNQTQVVCTEFSNYIFIVLTQYGKIGTLVSITPDTRSGDISVPMYTSKVL 67

  Fly    72 ---DNPEFHV--------------SVPITMNCCLGLDTDETRSAIQFLV 103
               |.|..||              :.||.:...|..::.||...::.::
Zfish    68 LGKDEPLTHVYAKNVATFVSQESGNRPILLGLSLKDNSAETMKTVKDMI 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11885NP_608522.1 PAC3 39..137 CDD:287187 19/83 (23%)
psmg3NP_001002529.1 PAC3 34..117 CDD:287187 19/83 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1469039at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR31051
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.110

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