DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11885 and psmg3

DIOPT Version :10

Sequence 1:NP_608522.1 Gene:CG11885 / 33215 FlyBaseID:FBgn0031253 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_001120261.1 Gene:psmg3 / 100145313 XenbaseID:XB-GENE-996246 Length:125 Species:Xenopus tropicalis


Alignment Length:127 Identity:33/127 - (25%)
Similarity:50/127 - (39%) Gaps:25/127 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TANKPRQIGFDRQFSADVNGVPTEIVFHCFAKKWFLVITQLGKIPGIYN-----VHFDVKKDERV 63
            |..||..:  .:|....:|||.|::|...|..:..:|:||.||:..:.:     |..|:.|....
 Frog     4 TDAKPAVV--SKQAEVVINGVATQVVCSAFTNQILVVVTQYGKMGTLVSVTPSLVSSDLGKPSLT 66

  Fly    64 VPYLHGPVDNPEFHVSVPITMNCCLGLDTDETRSAIQFLVNRTGLHKCPTEFVVGLGLKKID 125
            ...|.|. |.|..||       |...|.|         .|::...:| |....:.|..|.:|
 Frog    67 TKVLLGQ-DEPLVHV-------CAKNLVT---------FVSQEAKNK-PVLLSIALKDKSVD 110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11885NP_608522.1 PAC3 39..138 CDD:462980 23/92 (25%)
psmg3NP_001120261.1 PAC3 37..122 CDD:462980 23/92 (25%)

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