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Protein Alignment CG11885 and psmg3
DIOPT Version :9
Sequence 1: | NP_608522.1 |
Gene: | CG11885 / 33215 |
FlyBaseID: | FBgn0031253 |
Length: | 141 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001120261.1 |
Gene: | psmg3 / 100145313 |
XenbaseID: | XB-GENE-996246 |
Length: | 125 |
Species: | Xenopus tropicalis |
Alignment Length: | 127 |
Identity: | 33/127 - (25%) |
Similarity: | 50/127 - (39%) |
Gaps: | 25/127 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 TANKPRQIGFDRQFSADVNGVPTEIVFHCFAKKWFLVITQLGKIPGIYN-----VHFDVKKDERV 63
|..||..: .:|....:|||.|::|...|..:..:|:||.||:..:.: |..|:.|....
Frog 4 TDAKPAVV--SKQAEVVINGVATQVVCSAFTNQILVVVTQYGKMGTLVSVTPSLVSSDLGKPSLT 66
Fly 64 VPYLHGPVDNPEFHVSVPITMNCCLGLDTDETRSAIQFLVNRTGLHKCPTEFVVGLGLKKID 125
...|.|. |.|..|| |...|.| .|::...:| |....:.|..|.:|
Frog 67 TKVLLGQ-DEPLVHV-------CAKNLVT---------FVSQEAKNK-PVLLSIALKDKSVD 110
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG11885 | NP_608522.1 |
PAC3 |
39..137 |
CDD:287187 |
23/92 (25%) |
psmg3 | NP_001120261.1 |
PAC3 |
37..120 |
CDD:287187 |
23/92 (25%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1469039at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR31051 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 2.110 |
|
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