DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpLP1 and AT5G47700

DIOPT Version :10

Sequence 1:NP_476630.1 Gene:RpLP1 / 33214 FlyBaseID:FBgn0002593 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_199581.1 Gene:AT5G47700 / 834821 AraportID:AT5G47700 Length:113 Species:Arabidopsis thaliana


Alignment Length:117 Identity:68/117 - (58%)
Similarity:83/117 - (70%) Gaps:9/117 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGS 65
            |||..||||.||.:||.|:.:|:|.:||.|::|||.|.:|.|||.||||..|..||.|||.|:|:
plant     1 MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLIMNVGA 65

  Fly    66 -GVGAAPAGGAAPA----AAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
             |.|.||...||||    ||||||||    |||||:|.:::||.|:||||||
plant    66 GGGGGAPVAAAAPAAGGGAAAAAPAA----EEKKKDEPAEESDGDLGFGLFD 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpLP1NP_476630.1 Ribosomal_P1 6..111 CDD:100109 62/109 (57%)
AT5G47700NP_199581.1 Ribosomal_P1 6..112 CDD:100109 62/109 (57%)

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