DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpLP1 and AT4G00810

DIOPT Version :9

Sequence 1:NP_001259822.1 Gene:RpLP1 / 33214 FlyBaseID:FBgn0002593 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_567190.1 Gene:AT4G00810 / 828004 AraportID:AT4G00810 Length:113 Species:Arabidopsis thaliana


Alignment Length:114 Identity:66/114 - (57%)
Similarity:81/114 - (71%) Gaps:3/114 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGS 65
            |||..||||.||.:||.|:.:|:|.:||.|::|||.||:|.|||.||||..|..||.|||.|:|:
plant     1 MSTVGELACSYAVMILEDEGIAITSDKIATLVKAAGVEIESYWPMLFAKMAEKRNVTDLIMNVGA 65

  Fly    66 --GVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
              |.|.||...||||||..|.||...||| ||:|.:::||.|:||||||
plant    66 GGGGGGAPVSAAAPAAAGGAAAAAPAKEE-KKDEPAEESDGDLGFGLFD 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpLP1NP_001259822.1 Ribosomal_P1 6..111 CDD:100109 60/106 (57%)
AT4G00810NP_567190.1 Ribosomal_P1 6..112 CDD:100109 60/106 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 99 1.000 Domainoid score I2378
eggNOG 1 0.900 - - E1_COG2058
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 125 1.000 Inparanoid score I1936
OMA 1 1.010 - - QHG53507
OrthoDB 1 1.010 - - D1633925at2759
OrthoFinder 1 1.000 - - FOG0001374
OrthoInspector 1 1.000 - - otm2980
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45696
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1263
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.940

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