DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13690 and rnh201

DIOPT Version :9

Sequence 1:NP_608521.1 Gene:CG13690 / 33213 FlyBaseID:FBgn0031252 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_593684.1 Gene:rnh201 / 2541542 PomBaseID:SPAC4G9.02 Length:326 Species:Schizosaccharomyces pombe


Alignment Length:313 Identity:125/313 - (39%)
Similarity:177/313 - (56%) Gaps:23/313 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDQEDVVVKKEKKCIENIDENDEEPDDVDFKDSGKISSLKALGPFIAGKENSRNTVYLSDV-PD 64
            |.|..|....:|.....|..||:.:.|        :.||:..|.|.:.....:::..|.|.| .|
pombe     1 MKDDHDAWEPEELVSDNNSSENELQED--------QNSSITFLPPSVNKSNPAKSNYYHSTVTDD 57

  Fly    65 ICKDKPCMLGVDEAGRGPVLGPMVYGISYCPLESNKALEDLGCADSKQLTEGKRDIIFNDI-NTK 128
            |.|.:|..|||||||||||||||||.::|||::.:  |.:.|.||||.|...||:.:...| |..
pombe    58 ISKSQPYRLGVDEAGRGPVLGPMVYAVAYCPVDFD--LTNYGFADSKTLASLKREELLKLICNKS 120

  Fly   129 EYATSCVGWAVEIISPNTISTSMYR-RSKCSLNEVSMDSAMGLIQQAIDAGVNIAEVYVDTVGPP 192
            ......|||:...||...::..|.| |:|.:||..:.|:.:.||::..::|:|:.|:||||||||
pombe   121 NELGKNVGWSTMSISARELAAGMLRYRNKYNLNLQAHDTTIDLIKKVYESGINVTEIYVDTVGPP 185

  Fly   193 EKYQEKLLKRFPSFKITVAKKADSTYPIVSAASICAKVTRDHALKVWSFPEGLVIKDNEFGSGYP 257
            ..|||||...||..|:||.|||||.:||||.||||||||||..|:.    ....|:...:||||.
pombe   186 ISYQEKLQAHFPQAKVTVTKKADSLFPIVSLASICAKVTRDIQLEC----ARESIRTENWGSGYS 246

  Fly   258 GDPVTRRFLTEYIDLVFGFP-RLVRFSWSTAENAL-----ADKAYDMEFDEPD 304
            .|..|..:|...:|.:||:. .:||:||.||::.|     :..:.::::.|.|
pombe   247 SDARTTEWLKVNVDKIFGWKGDIVRYSWKTAKDLLELPSKSQSSIEIDWHEDD 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13690NP_608521.1 RNase_HII_eukaryota_like 73..295 CDD:260002 104/229 (45%)
rnh201NP_593684.1 RNase_HII_eukaryota_like 66..282 CDD:260002 103/221 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 178 1.000 Domainoid score I830
eggNOG 1 0.900 - - E1_COG0164
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H4664
Inparanoid 1 1.050 197 1.000 Inparanoid score I1017
OMA 1 1.010 - - QHG62152
OrthoFinder 1 1.000 - - FOG0003820
OrthoInspector 1 1.000 - - oto101358
orthoMCL 1 0.900 - - OOG6_100555
Panther 1 1.100 - - LDO PTHR10954
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1166
SonicParanoid 1 1.000 - - X3184
TreeFam 1 0.960 - -
1312.860

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