DRSC/TRiP Functional Genomics Resources

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Protein Alignment ebi and WDR38

DIOPT Version :9

Sequence 1:NP_477329.1 Gene:ebi / 33212 FlyBaseID:FBgn0263933 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001263303.1 Gene:WDR38 / 401551 HGNCID:23745 Length:315 Species:Homo sapiens


Alignment Length:299 Identity:85/299 - (28%)
Similarity:135/299 - (45%) Gaps:30/299 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   401 QKGGAEVPSNKDVTSLDWNCDGSLLATGSYDGYARIWKT-DGRLASTLGQHKGPIFALKWNKCGN 464
            |.||       :|.|..::.||.:|.|||.||....|:| .|:|...||.|.||:...:::..|:
Human    19 QHGG-------EVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDGH 76

  Fly   465 YILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQ-TNQAFASCSTDQRIHVCRLGVNEPIK 528
            ...||..|.|..:||.:..:|.:....|......|.:. .::..||...|:|:.:..:...:.::
Human    77 LFASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQSGQMLR 141

  Fly   529 TFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWS--MNRDRCCHD-LQAHSKEIYTIKWSPTGPG 590
            ...||.:.:.:..:.|....||:.|.|.|:.||.  |......|. |:.||..|..:.:|.:|  
Human   142 LLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWDLRMVTPAVSHQALEGHSANISCLCYSASG-- 204

  Fly   591 TNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKHLASGSFDKCVHIWS 655
                    :|||.|:|.|:.:|.....|.:..|..|...|.|:|||||...|||..:.:.|.:|.
Human   205 --------LLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLASAGYSRMVKVWD 261

  Fly   656 TQTGQLVHSYKGTGGIFEVCWNSKGTKVGASASDGSVFV 694
            ..||:.:.:.|  .|:.:|....      |...||.:.|
Human   262 CNTGKCLETLK--QGVLDVAHTC------AFTPDGKILV 292

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
ebiNP_477329.1 LisH 6..32 CDD:285685
WD40 349..655 CDD:238121 75/258 (29%)