DRSC/TRiP Functional Genomics Resources

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Protein Alignment ebi and tbl1xr1b

DIOPT Version :9

Sequence 1:NP_477329.1 Gene:ebi / 33212 FlyBaseID:FBgn0263933 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001313469.1 Gene:tbl1xr1b / 393581 ZFINID:ZDB-GENE-040426-1192 Length:510 Species:Danio rerio


Alignment Length:702 Identity:389/702 - (55%)
Similarity:435/702 - (61%) Gaps:195/702 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSFSSDEVNFLVYRYLQESGFLHSAYVFGIESHISQSNINGALVPPAALLTILQKGLLYTEVEWS 65
            ||.||||||||||||||||||.|||:.||||||||||||||||||||||::|:||||.|.|.|.|
Zfish     1 MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYVEAEVS 65

  Fly    66 VGEDGEV--ARPIEGLSLIDAVMPEVKPLKPIVKTEPGKPGAVDSSAPAGGNQNNNAKPEIKIEP 128
            :.|||.:  .||||.|||||||||:|      |:|.                             
Zfish    66 INEDGTLFDGRPIESLSLIDAVMPDV------VQTR----------------------------- 95

  Fly   129 GTGVAGSAGGNKIAGSTTGTSTPTDQSASEVDSSGNAANNAGGTYAGNNGAGGNQASTGGSNSTS 193
                                                                             
Zfish    96 ----------------------------------------------------------------- 95

  Fly   194 TPAGGDLAAPGASQKKSQNSNEAGSSSSGNAGNANATSTDDAASSTSTNGNSSTSSSVEQPTSGL 258
                                              .....|..|...:.:.:|:|::         
Zfish    96 ----------------------------------QQVYKDKLAQQQAASASSATTA--------- 117

  Fly   259 TPAGGTVSTSNPDAAASGGASTATGSKAPSGAVTIRVGAQGNNVQSGSSNAQSSAPSGTISSSTS 323
                         |||..|.:||.|.:  :||.|:             ||..|..          
Zfish   118 -------------AAAKNGENTANGEE--NGAHTL-------------SNHHSDM---------- 144

  Fly   324 GGAGTPAALVPMDIDENIEIPESKARVLRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSDAN 388
                       |::|..:|||.|||.||||||||||||||||..|||||||||||||||::|:::
Zfish   145 -----------MEVDRAVEIPASKAMVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSESS 198

  Fly   389 T-NSNQLVLRHCIQKGGAEVPSNKDVTSLDWNCDGSLLATGSYDGYARIWKTDGRLASTLGQHKG 452
            | .|.||||||||::||.:|||||||||||||.:|:|||||||||:||||..||.||||||||||
Zfish   199 TGGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLASTLGQHKG 263

  Fly   453 PIFALKWNKCGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAFASCSTDQRIH 517
            |||||||||.||:|||||||||||||||.||:..|||.||||||||||||:|..|||||||..||
Zfish   264 PIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIH 328

  Fly   518 VCRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTI 582
            ||:||...|||||:|||||||||||.|.|.||||||||||||:|||.:|.|.|||||||||||||
Zfish   329 VCKLGQERPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTCVHDLQAHSKEIYTI 393

  Fly   583 KWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKHLASGSF 647
            |||||||||||||.||:||||||||||||||.|||:||||||||.||||||||||||:|||||||
Zfish   394 KWSPTGPGTNNPNANLMLASASFDSTVRLWDAERGACIHTLTKHQEPVYSVAFSPDGRHLASGSF 458

  Fly   648 DKCVHIWSTQTGQLVHSYKGTGGIFEVCWNSKGTKVGASASDGSVFVLDLRK 699
            |||||||:||:|.||:||:||||||||||||.|.|||||||||||.||||||
Zfish   459 DKCVHIWNTQSGALVNSYRGTGGIFEVCWNSTGDKVGASASDGSVCVLDLRK 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ebiNP_477329.1 LisH 6..32 CDD:285685 22/25 (88%)
WD40 349..655 CDD:238121 253/306 (83%)
WD40 repeat 358..402 CDD:293791 34/44 (77%)
WD40 repeat 414..449 CDD:293791 27/34 (79%)
WD40 repeat 454..490 CDD:293791 29/35 (83%)
eIF2A 457..665 CDD:285825 172/207 (83%)
WD40 repeat 497..531 CDD:293791 24/33 (73%)
WD40 repeat 537..573 CDD:293791 27/35 (77%)
WD40 repeat 579..624 CDD:293791 40/44 (91%)
WD40 repeat 630..654 CDD:293791 22/23 (96%)
tbl1xr1bNP_001313469.1 LisH 6..32 CDD:285685 22/25 (88%)
WD40 <121..300 CDD:225201 130/214 (61%)
WD40 160..466 CDD:238121 253/305 (83%)
WD40 repeat 168..211 CDD:293791 32/42 (76%)
WD40 repeat 224..260 CDD:293791 28/35 (80%)
WD40 repeat 265..302 CDD:293791 30/36 (83%)
eIF2A 268..476 CDD:285825 172/207 (83%)
WD40 repeat 308..343 CDD:293791 25/34 (74%)
WD40 repeat 348..384 CDD:293791 27/35 (77%)
WD40 repeat 391..435 CDD:293791 39/43 (91%)
WD40 repeat 441..477 CDD:293791 30/35 (86%)
WD40 repeat 482..508 CDD:293791 22/25 (88%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576186
Domainoid 1 1.000 78 1.000 Domainoid score I8703
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 638 1.000 Inparanoid score I799
OMA 1 1.010 - - QHG53955
OrthoDB 1 1.010 - - D1463197at2759
OrthoFinder 1 1.000 - - FOG0002050
OrthoInspector 1 1.000 - - otm24591
orthoMCL 1 0.900 - - OOG6_102387
Panther 1 1.100 - - O PTHR22846
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R560
SonicParanoid 1 1.000 - - X1519
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.940

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