DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ebi and Tbl1x

DIOPT Version :9

Sequence 1:NP_477329.1 Gene:ebi / 33212 FlyBaseID:FBgn0263933 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001100434.1 Gene:Tbl1x / 302711 RGDID:1563868 Length:527 Species:Rattus norvegicus


Alignment Length:702 Identity:398/702 - (56%)
Similarity:444/702 - (63%) Gaps:178/702 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSFSSDEVNFLVYRYLQESGFLHSAYVFGIESHISQSNINGALVPPAALLTILQKGLLYTEVEWS 65
            ||.:|||||||||||||||||.|||:.||||||||||||||.|||||||::||||||.|.|.|.|
  Rat     1 MSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEIS 65

  Fly    66 VGEDGEV--ARPIEGLSLIDAVMPEVKPLKPIVKTEPGKPGAVDSSAPAGGNQNNNAKPEIKIEP 128
            :.|||.|  .||||.|||||||||:|                                       
  Rat    66 INEDGTVFDGRPIESLSLIDAVMPDV--------------------------------------- 91

  Fly   129 GTGVAGSAGGNKIAGSTTGTSTPTDQSASEVDSSGNAANNAGGTYAGNNGAGGNQASTGGSNSTS 193
                                 ..|.|.|..                                   
  Rat    92 ---------------------VQTRQQAFR----------------------------------- 100

  Fly   194 TPAGGDLAAPGASQKKSQNSNEAGSSSSGNAGNANATSTDDAASSTSTNGNSSTSSSVEQPTSGL 258
                         :|.:|.             .|||.:...||::|:|:            |:..
  Rat   101 -------------EKLAQQ-------------QANAAAAAAAAAATATS------------TAAT 127

  Fly   259 TPAGGTVSTSNPDAAASGGASTATGSKAPSGAVTIRVGAQGNNVQSGSSNAQSSAPSGTISSSTS 323
            |||  ..:..||   ...|.:|..|.:  :||..|      ||...                   
  Rat   128 TPA--AAAQQNP---PKNGEATVNGEE--NGAHAI------NNHSK------------------- 160

  Fly   324 GGAGTPAALVPMDIDENIEIPESKARVLRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSD-A 387
                      ||:||.::|||.|||.||||||||||||||||..|||||||||||||||:::: :
  Rat   161 ----------PMEIDGDVEIPPSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENS 215

  Fly   388 NTNSNQLVLRHCIQKGGAEVPSNKDVTSLDWNCDGSLLATGSYDGYARIWKTDGRLASTLGQHKG 452
            |..|.||||||||::||.:|||||||||||||.||:|||||||||:||||..||.||||||||||
  Rat   216 NGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQHKG 280

  Fly   453 PIFALKWNKCGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAFASCSTDQRIH 517
            |||||||||.||||||||||||||||||.||:..|||.||||||||||||.|..|||||||..||
  Rat   281 PIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIH 345

  Fly   518 VCRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTI 582
            |||||.:.|:|||:|||||||||||.|.|.||||||||||||||||.:|.|.|||||||||||||
  Rat   346 VCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTI 410

  Fly   583 KWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKHLASGSF 647
            |||||||.|:|||:|::||||||||||||||||||.||||||||.|||||||||||||:||||||
  Rat   411 KWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSF 475

  Fly   648 DKCVHIWSTQTGQLVHSYKGTGGIFEVCWNSKGTKVGASASDGSVFVLDLRK 699
            |||||||:||:|.|||||:|||||||||||::|.|||||||||||.||||||
  Rat   476 DKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARGDKVGASASDGSVCVLDLRK 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ebiNP_477329.1 LisH 6..32 CDD:285685 22/25 (88%)
WD40 349..655 CDD:238121 253/306 (83%)
WD40 repeat 358..402 CDD:293791 33/44 (75%)
WD40 repeat 414..449 CDD:293791 28/34 (82%)
WD40 repeat 454..490 CDD:293791 30/35 (86%)
eIF2A 457..665 CDD:285825 173/207 (84%)
WD40 repeat 497..531 CDD:293791 24/33 (73%)
WD40 repeat 537..573 CDD:293791 28/35 (80%)
WD40 repeat 579..624 CDD:293791 38/44 (86%)
WD40 repeat 630..654 CDD:293791 22/23 (96%)
Tbl1xNP_001100434.1 LisH 7..31 CDD:369916 20/23 (87%)
WD40 177..483 CDD:238121 253/305 (83%)
WD40 repeat 185..232 CDD:293791 33/46 (72%)
WD40 repeat 242..277 CDD:293791 28/34 (82%)
WD40 repeat 282..318 CDD:293791 30/35 (86%)
WD40 repeat 325..359 CDD:293791 24/33 (73%)
WD40 repeat 365..401 CDD:293791 28/35 (80%)
WD40 repeat 407..452 CDD:293791 38/44 (86%)
WD40 repeat 458..482 CDD:293791 22/23 (96%)
WD40 repeat 499..525 CDD:293791 21/25 (84%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337052
Domainoid 1 1.000 81 1.000 Domainoid score I8311
eggNOG 1 0.900 - - E2759_KOG0273
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4128
Inparanoid 1 1.050 649 1.000 Inparanoid score I762
OMA 1 1.010 - - QHG53955
OrthoDB 1 1.010 - - D1463197at2759
OrthoFinder 1 1.000 - - FOG0002050
OrthoInspector 1 1.000 - - otm45047
orthoMCL 1 0.900 - - OOG6_102387
Panther 1 1.100 - - LDO PTHR22846
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1519
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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