DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ebi and unc-37

DIOPT Version :10

Sequence 1:NP_477329.1 Gene:ebi / 33212 FlyBaseID:FBgn0263933 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_491932.1 Gene:unc-37 / 172394 WormBaseID:WBGene00006773 Length:612 Species:Caenorhabditis elegans


Alignment Length:646 Identity:137/646 - (21%)
Similarity:232/646 - (35%) Gaps:179/646 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 AVDSSAPAGGNQNNNAKPEIKIEPG--TGVAGSAG--GNKIAGSTTGTSTPTDQSAS-EVDSSGN 164
            |:::...|...:|.|..|  .:.||  .|.||..|  .|...|.:...|...:|.|| .|:    
 Worm    91 ALEAFKTASPRENGNGAP--ALPPGFPPGAAGMLGMMPNMPFGMSPAMSQLFNQFASPHVN---- 149

  Fly   165 AANNAGGTYAGNNGAGGNQASTGGSNST-----STPAGGDLAAPGASQKKSQNSNEAGSSSSGNA 224
                      |.:||||   |:||::..     ..|..|:|      :....|.:...::|:|.|
 Worm   150 ----------GGDGAGG---SSGGASEAKKAKLEDPDDGEL------EIDVTNDDHPSTASNGGA 195

  Fly   225 GNANA-TSTDDAAS---STSTNGNSSTSSSVEQPTSGLTP-------AGGTVSTSNPD----AAA 274
            .|.|. .||:..||   ||.:..::|.:...:||.:||..       ||     .||:    |:|
 Worm   196 ANKNGRDSTNSVASSGASTPSIASNSRARQQQQPLAGLQGLEQMNFLAG-----FNPNLLRQASA 255

  Fly   275 SGGASTATGSKAPSGAVTIRVGAQGNNVQSGSSNAQSSAPSGTISSS-------TSGGAGTPAAL 332
            :||.                     |.:....:.|:.:|..|.|.|.       ..||..||.:.
 Worm   256 AGGF---------------------NFLNDPHAQARLAAAIGQIGSRPAYSFKIVDGGVPTPTSF 299

  Fly   333 VPMDIDENIEIPESKARVLRGHESEVFICAWNPSRD---LLASGSGDSTARIWDMSDANTNSNQL 394
             |.|..:...||....:.:..:..|| :||...|||   :...|.|  ..:|||:.:::.:    
 Worm   300 -PPDAQKGPGIPTGLKKKMELNHGEV-VCAATISRDNSRVYTGGKG--CVKIWDVKESDIS---- 356

  Fly   395 VLRHCIQKGGAEVPSNKDVTSLDWNCDGSLLATGSYDGYARIWKTDGRLASTLGQHKGPIFALKW 459
                     ||.|.:...:.|||  |        ..:.|.|                    :.|.
 Worm   357 ---------GATVVNRPPIASLD--C--------LKENYIR--------------------SCKL 382

  Fly   460 NKCGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAFA---------SCSTDQR 515
            .:.||.:|..|...|..:||.:|...|..        |:.|.|...|.|         :|..|..
 Worm   383 FEDGNTLLIGGEASTVALWDLTTETKTLD--------LETDSQACYALAMSPDEKLLFACLADGN 439

  Fly   516 IHVCRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSM--NRDRCCHDLQAHSKE 578
            |.:..:.....:.|..||.:..:.:.....|..|.|...|.:::.|.:  .::...||.   :.:
 Worm   440 ILIYDIHNKVKVGTLPGHQDGASCLDLSKDGTKLWSGGLDNSVRCWDLAQRKEVAKHDF---ASQ 501

  Fly   579 IYTI------KWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSP 637
            ::::      :|...|...|...   :|::.             |...:.||:|...|.|:.|:.
 Worm   502 VFSLGCCPNDEWVAVGMENNYVE---VLSTT-------------GKEKYQLTQHESCVLSLKFAH 550

  Fly   638 DGKHLASGSFDKCVHIWSTQTGQLVHSYKGTGGIF--EVCWNSKGTKVGASASDGSVFVLD 696
            .||...|...|..::.|.|..|..:...|....:.  ::.::......|:.....:::.::
 Worm   551 SGKFFISTGKDNALNAWRTPYGASLFQLKENSSVLSCDISFDDSLIVTGSGEKKATLYAVE 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ebiNP_477329.1 LisH 3..36 CDD:128913
dermokine <101..>312 CDD:455732 56/231 (24%)
WD40 349..655 CDD:238121 64/325 (20%)
WD40 repeat 358..402 CDD:293791 11/46 (24%)
WD40 repeat 414..449 CDD:293791 6/34 (18%)
WD40 repeat 454..490 CDD:293791 10/35 (29%)
WD40 repeat 497..531 CDD:293791 9/42 (21%)
WD40 repeat 537..573 CDD:293791 7/37 (19%)
WD40 repeat 579..624 CDD:293791 5/50 (10%)
WD40 repeat 630..654 CDD:293791 7/23 (30%)
unc-37NP_491932.1 TLE_N 1..102 CDD:461094 2/10 (20%)
WD40 222..611 CDD:441893 95/488 (19%)
WD40 repeat 325..371 CDD:293791 16/62 (26%)
WD40 repeat 378..414 CDD:293791 12/63 (19%)
WD40 repeat 419..455 CDD:293791 6/35 (17%)
WD40 repeat 462..497 CDD:293791 5/34 (15%)
WD40 repeat 502..537 CDD:293791 5/50 (10%)
WD40 repeat 543..577 CDD:293791 10/33 (30%)
WD40 repeat 584..608 CDD:293791 1/23 (4%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.