DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-2alpha and AT1G33700

DIOPT Version :10

Sequence 1:NP_995607.1 Gene:AP-2alpha / 33211 FlyBaseID:FBgn0264855 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_174631.2 Gene:AT1G33700 / 840261 AraportID:AT1G33700 Length:947 Species:Arabidopsis thaliana


Alignment Length:268 Identity:58/268 - (21%)
Similarity:92/268 - (34%) Gaps:91/268 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   677 LGLSTPPSNNIGSGSNSNSTLIDVLGDMYGSNSNNNSSAVYNTKKFLFKNNGVLFENEMLQIGVK 741
            |||||...|:    .:.|:..:|:||.:         .||.:.......:|..| .|.|:|    
plant   467 LGLSTIDKND----QDQNNVALDILGRI---------DAVCSQIHAPLTSNAAL-GNTMIQ---- 513

  Fly   742 SEFRQNLGRLGLFYGNKTQVPLTNFNPVLQWSAEDALKLNVQMKVVEPTLEAGAQIQQLLTAECI 806
             ...:|:|:  ..|....|..:.|...|..:|:...|.|       .|.:|...|          
plant   514 -NTTENIGQ--FLYLEGVQYLMYNTYDVHFYSSFALLML-------FPKIELSIQ---------- 558

  Fly   807 EDYADAPTIEISFRYNGTQQKFSIKLPLSVNKFF---------------EP-TEMNAESFF--AR 853
            .|:|.|..:..|          |.|..:|..:|.               :| .|:||.:.|  .|
plant   559 RDFAAAVLMHDS----------SKKQVMSSGEFVTRKVLGAVPHDIGLNDPWFELNAYNLFNTDR 613

  Fly   854 WKNLSGEQQRSQKVFKAAQPLDLPGARNKLMGF------GMQLLDQVDPNPDNMV---------- 902
            ||:|:     |:.|.:..:.:...|..|.....      .:..|||.|.:.|.|:          
plant   614 WKDLN-----SKFVLQVYRDVVATGDLNFAKAVWPSVYTAIAYLDQFDKDGDGMIENEGFPDQTY 673

  Fly   903 ----CAGI 906
                |:|:
plant   674 DAWSCSGV 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-2alphaNP_995607.1 Adaptin_N 40..603 CDD:396262
Alpha_adaptinC2 730..839 CDD:197886 23/108 (21%)
Alpha_adaptin_C 839..947 CDD:426707 22/106 (21%)
AT1G33700NP_174631.2 COG4354 95..885 CDD:443491 58/268 (22%)
DUF608 520..880 CDD:461391 40/196 (20%)
Blue background indicates that the domain is not in the aligned region.

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