DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AP-2alpha and AT5G49900

DIOPT Version :10

Sequence 1:NP_995607.1 Gene:AP-2alpha / 33211 FlyBaseID:FBgn0264855 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_199801.2 Gene:AT5G49900 / 835053 AraportID:AT5G49900 Length:957 Species:Arabidopsis thaliana


Alignment Length:539 Identity:97/539 - (17%)
Similarity:174/539 - (32%) Gaps:186/539 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   515 ILGEFGNLIAGDSRSA-----------PLVQFKLLHSK---------YHLCSPMTRALLLSTYIK 559
            :|..:.|.:.|||..:           ..||..|||.|         |.:.:..|..:.:|....
plant   238 LLFTWANSVGGDSEFSGGHYNSKITMNDGVQGVLLHHKTANGLPSLSYAISAQATDGVSVSACPF 302

  Fly   560 FINLFPEIRTNIQDVFR------QHSNLRSADAELQQRASEYLQLSIVASTDVLA--------TV 610
            ||....:.....:|:::      ...:|::::|.:|......:..::.||..||.        ::
plant   303 FIVSGKQDGITAKDMWQAVKENGSFDHLKASEASMQSDHGSSIGAAVAASVTVLPGESRIVTFSL 367

  Fly   611 LEEMP--SFPE----------------------RESSILA--------------VLKKKK-PGRV 636
            ..:.|  .||.                      ...:||.              :|:.|: |...
plant   368 AWDCPEVQFPSGKIYSRRYTKFYGNNGDAAAQIAHDAILGHSQWESWIEDWQRPILEDKRLPAWY 432

  Fly   637 PE---NEIRESKSPAPL----TSAAQNNALVNNSHSKLNNSNANTDLLGLSTPPSNNIGSGSNSN 694
            |.   ||:....|...|    :|...:.|.|......|:.|.     |||    .|:| ...:.|
plant   433 PVTLFNELYYLNSGGTLWTDGSSPVHSLAGVREKKFSLDKSQ-----LGL----KNDI-DVPHQN 487

  Fly   695 STLIDVLGDMYGS----NSNNNSSAVYNTKKFLFKNNGVLFENEMLQIGVKSEFRQNLGRLGLFY 755
            .|.:.||..|..:    :::..|::.:.||        :|.|.|           :|:|......
plant   488 DTAVSVLEKMASTLEELHASTTSNSAFGTK--------LLEEGE-----------ENIGHFLYLE 533

  Fly   756 GNKTQVPLTNFNPVLQWSAEDA-LKLNVQMKVVEPTLEAGAQIQQLLTAECIEDYADAPTIEISF 819
            |.:.::          |:..|. ...:..:.::.|.||...| :....|..:.|.....|:.   
plant   534 GIEYRM----------WNTYDVHFYASFALVMLFPKLELSIQ-RDFAAAVMLHDPTKVKTLS--- 584

  Fly   820 RYNGTQQKFSIKLP--LSVN-KFFEP---TEMNAESFFARWKNL--------------SGEQQRS 864
            .....|:|....:|  |.:| .:||.   |..|.:    |||:|              :|:::.:
plant   585 EGQWVQRKVLGAVPHDLGINDPWFEVNGYTLHNTD----RWKDLNPKFVLQVYRDVVATGDKKFA 645

  Fly   865 QKVFKAAQPLDLPGARNKLMGFGMQLLDQVDPNPDNMV---------------------CAGIIH 908
            ..|:.:..             ..|..:.|.|.:.|.|:                     |.|:..
plant   646 SAVWPSVY-------------VAMAYMAQFDKDGDGMIENEGFPDQTYDTWSASGVSAYCGGLWV 697

  Fly   909 TQSQQVGCLMRLEPNKQAQ 927
            ...|....|.|:..:|.:|
plant   698 AALQAASALARVVGDKNSQ 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-2alphaNP_995607.1 Adaptin_N 40..603 CDD:396262 20/113 (18%)
Alpha_adaptinC2 730..839 CDD:197886 20/112 (18%)
Alpha_adaptin_C 839..947 CDD:426707 22/127 (17%)
AT5G49900NP_199801.2 Glyco_hydr_116N 93..411 CDD:463496 29/172 (17%)
DUF608 527..888 CDD:461391 38/221 (17%)

Return to query results.
Submit another query.