DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AP-2alpha and AT5G22780

DIOPT Version :9

Sequence 1:NP_995607.1 Gene:AP-2alpha / 33211 FlyBaseID:FBgn0264855 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_001330127.1 Gene:AT5G22780 / 832341 AraportID:AT5G22780 Length:1013 Species:Arabidopsis thaliana


Alignment Length:987 Identity:377/987 - (38%)
Similarity:562/987 - (56%) Gaps:102/987 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 CKSKEAEVKRINKELANIRSKFKGDKTLDGYQKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSNK 98
            |::||||..|::|||.|||:.||.:|.|..|:|||||.|:|:|.:||:|:||||||||:|:|:.|
plant    17 CQNKEAERLRVDKELGNIRTCFKNEKVLTPYKKKKYVWKMLYIHMLGYDVDFGHMEAVSLISAPK 81

  Fly    99 YSEKQIGYLFISVLVNTNSDLIRLIIQSIKNDLQSRNPVHVNLALQCIANIGSRDMAESFSNEIP 163
            |.|||:||:..|.|:|.|.|.::|.|.:::||:..||.....|||..:.|||.||.|||.:.::.
plant    82 YPEKQVGYIVTSCLLNENHDFLKLAINTVRNDIIGRNETFQCLALTLVGNIGGRDFAESLAPDVQ 146

  Fly   164 KLLVSGDTMDVVKQSAALCLLRLFRSSPDIIPGGEWTSRIIHLLNDQHMGVVTAATSLIDALVKR 228
            |||:|.....:|::.||||||||||.:||.:....|..|:..||:::.:||:|::|||:.|||..
plant   147 KLLISSSCRPLVRKKAALCLLRLFRKNPDAVNVDGWADRMAQLLDERDLGVLTSSTSLLVALVSN 211

  Fly   229 NPDEYKGCVNLAVSRLSRIVTASYTDL-QDYTYYFVPAPWLSVKLLRLLQNYNPVTEEAGVRARL 292
            |.:.|..|:...|..|.|:  |...|: |:||||.:|:|||.||.:|.|| |.|..|:...|..|
plant   212 NHEAYSSCLPKCVKILERL--ARNQDVPQEYTYYGIPSPWLQVKAMRALQ-YFPTIEDPSTRKAL 273

  Fly   293 NETLETILNKAQEPPKSKKVQHSNAKNAVLFEAINLIIHSDSEPNLLVRACNQLGQFLSNRETNL 357
            .|.|:.||   ......|.|..:||.:||||||::|::|.|:|..::.:....||:|:|.||.|:
plant   274 FEVLQRIL---MGTDVVKNVNKNNASHAVLFEALSLVMHLDAEKEMMSQCVALLGKFISVREPNI 335

  Fly   358 RYLALESMCHLATSEFSHEEVKKHQEVVILSMKMEKDVSVRQMAVDLLYAMCDRGNAEEIVQEML 422
            |||.||:|..:.......:.:||||..:|.|:| :.|:|:|:.|:||||.|||..||::||:|:|
plant   336 RYLGLENMTRMLMVTDVQDIIKKHQSQIITSLK-DPDISIRRRALDLLYGMCDVSNAKDIVEELL 399

  Fly   423 NYLETADYSIREEMVLKVAILAEKYATDYTWYVDVILNLIRIAGDYVSEEVWYRVIQIVINREEV 487
            .||.||::|:|||:.||.||||||:|.|.:|||||||.||..|||:||:::|:||:|.|.|.|::
plant   400 QYLSTAEFSMREELSLKAAILAEKFAPDLSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDL 464

  Fly   488 QGYAAKTVFEALQAPACHENMVKVGGYILGEFGNLIAGDSRSAPLVQFKLLHSKYHLCSPMTRAL 552
            |.|||....|.:...|.||.||||..|||||:|:|:|.....:....|.:||.|....|..|..:
plant   465 QPYAASKAREYMDKIAIHETMVKVSAYILGEYGHLLARQPGCSASELFSILHEKLPTVSTPTIPI 529

  Fly   553 LLSTYIKFINLF----PEIRTNIQDVFRQHSNLRSADAELQQRASEYLQLSI--VASTDVLATVL 611
            |||||.|.:...    ||::..:..||:::.:  ..|.|:||||.||.:||.  .|..||||   
plant   530 LLSTYAKLLMHAQPPDPELQKKVWAVFKKYES--CIDVEIQQRAVEYFELSKKGPAFMDVLA--- 589

  Fly   612 EEMPSFPERESSILAVLKKKKPGRVPEN------EIRESKSPAPLTSAAQNNALVNNSHSKLNNS 670
             |||.||||:||::     ||...|.:.      ::|..:.|        :||:|......:|.:
plant   590 -EMPKFPERQSSLI-----KKAENVEDTADQSAIKLRAQQQP--------SNAIVLADPQPVNGA 640

  Fly   671 --NANTDLLGLSTPPSNNIGSGSNSNSTLI---------DVLGDMYG------------------ 706
              .....:|..||.|.:...|.|:.|.||.         |:|.|:.|                  
plant   641 PPPLKVPILSGSTDPESVARSLSHPNGTLSNIDPQTPSPDLLSDLLGPLAIEAPPGAVSYEQHGP 705

  Fly   707 ------------------SNSNNNSSAVYN-TKKF---LFKNNGVLFENEMLQIGVKSEFRQNLG 749
                              ....|....:.| .::|   ..|::|||:|:..:|||:|:|:|.:.|
plant   706 VGAEGVPDEIDGSAIVPVEEQTNTVELIGNIAERFHALCLKDSGVLYEDPHIQIGIKAEWRGHHG 770

  Fly   750 RLGLFYGNKTQVPLTNFNPVLQWSAEDALKLNVQMKVVEPTLEAGAQIQQLLTAECIEDYADAPT 814
            ||.||.|||...|||:...::...|.    |.:.:..|..|:...||:|..|....|....|...
plant   771 RLVLFMGNKNTSPLTSVQALILPPAH----LRLDLSPVPDTIPPRAQVQSPLEVMNIRPSRDVAV 831

  Fly   815 IEISFRYNGTQQKFSIKLPLSVNKFFEPTEMNAESFFARWKNLSGEQQRSQKVFKAAQPLDLPGA 879
            ::.|:::........:::|.::|||.:|.::.:|.||.:|:.:||...:.|:|.:..:||.||..
plant   832 LDFSYKFGTNVVSAKLRIPATLNKFLQPLQLTSEEFFPQWRAISGPPLKLQEVVRGVRPLALPEM 896

  Fly   880 RNKLMGFGMQLLDQVDPNPDNMVCAGIIHTQSQQVG---CLMRLE--PNKQAQMFRLTVRASKET 939
            .|....|.:.:...:||||:|:|.:...:  |:..|   ||.|:|  |..:.|: ||||.:...|
plant   897 ANLFNSFHVTICPGLDPNPNNLVASTTFY--SETTGAMLCLARIETDPADRTQL-RLTVGSGDPT 958

  Fly   940 VTREICDLLTDQ 951
            :|.|:.:.:.:|
plant   959 LTFELKEFIKEQ 970

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-2alphaNP_995607.1 Adaptin_N 40..598 CDD:279882 258/562 (46%)
Alpha_adaptinC2 730..839 CDD:197886 32/108 (30%)
Alpha_adaptin_C 839..947 CDD:280460 37/112 (33%)
AT5G22780NP_001330127.1 Adaptin_N 23..582 CDD:279882 260/567 (46%)
HEAT repeat 323..347 CDD:293787 13/23 (57%)
HEAT repeat 359..387 CDD:293787 14/28 (50%)
HEAT repeat 397..427 CDD:293787 19/29 (66%)
Alpha_adaptinC2 751..844 CDD:197886 30/96 (31%)
Alpha_adaptin_C 856..965 CDD:280460 37/111 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 486 1.000 Domainoid score I83
eggNOG 1 0.900 - - E1_COG4354
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5335
Inparanoid 1 1.050 646 1.000 Inparanoid score I177
OMA 1 1.010 - - QHG53727
OrthoDB 1 1.010 - - D751651at2759
OrthoFinder 1 1.000 - - FOG0002465
OrthoInspector 1 1.000 - - otm3231
orthoMCL 1 0.900 - - OOG6_101447
Panther 1 1.100 - - O PTHR22780
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1882
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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