DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AP-2alpha and AT4G10060

DIOPT Version :10

Sequence 1:NP_995607.1 Gene:AP-2alpha / 33211 FlyBaseID:FBgn0264855 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_192744.6 Gene:AT4G10060 / 826597 AraportID:AT4G10060 Length:922 Species:Arabidopsis thaliana


Alignment Length:533 Identity:103/533 - (19%)
Similarity:176/533 - (33%) Gaps:191/533 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 QSIKNDLQSRNPVHVNLALQCIAN--------IGSRDMAESFSNEIPKLLVSG---------DTM 172
            :...:.:..|:.||..:......|        |.:::..:...:|.|..||||         :..
plant   248 EHFNSTIMERDGVHAIVLHHKTGNGHPPVTYAIAAQETEDVHVSECPCFLVSGHSPKEITAKEMW 312

  Fly   173 DVVKQSAALCLLRLFRSSPDIIPGGEWTSRIIHLLNDQHMGVVTAATSLIDALVKRNPDEYKGCV 237
            |.:|::.:...|.....||. .||                   |:..:.|.|.||..|    || 
plant   313 DEIKKNKSFDELNSEPGSPS-RPG-------------------TSIGAAIAAKVKVPP----GC- 352

  Fly   238 NLAVSRLSRIVTASY------------TDLQDYTYYFVPAPWLSVKLLR-LLQNYNPVTEEAGVR 289
                   .|.||.|.            |..:.||.::......:||:.| .|.||  |..|:.:.
plant   353 -------DRTVTFSLSWDCPEVRFNEKTYHRRYTKFYGNLGDAAVKMARDALLNY--VDWESQIE 408

  Fly   290 ARLNETLE----------TILNKAQE------------PPKS----KKVQHSNAKNAV--LFEAI 326
            |..:..|.          |:.|:...            |||.    .||.::...:.|  ||:.|
plant   409 AWQSPILSDTTLPDWYRVTLFNELYYFNSGGTIWTDGLPPKESIERSKVTNTEQNDIVIDLFQKI 473

  Fly   327 NLIIHSDSEPNLLVRACNQL-GQFLSNRETNL-RYLALESMCHLATSEFSHEEVKKHQEVVILSM 389
            |.:             |.|: ....||.|.|: :::.||.:.:|..:.:   :|..:....:||:
plant   474 NAV-------------CEQIYSPQSSNSEENIGQFIYLEGIEYLMYNTY---DVHFYSSFALLSL 522

  Fly   390 KMEKDVSV-RQMAVDLLYAMCDR----GNAEEIVQEMLN-----------YLETADYS------- 431
            ..:..:|: |..|..:|.....:    .:.|.:.:::|.           :||..:|:       
plant   523 FPKLALSIQRDFAATVLIQDPTKKKIMSSGEWVTRKLLGSVPHDIGLNDPWLELNEYNFFNTDRW 587

  Fly   432 --IREEMVLKVAILAEKYATDYTWYVDVILNLIRIAGDYVSEEVWYRVIQIV-----INREE--- 486
              :..:.||:|             |.||:..    .....::.||..|...|     .:::|   
plant   588 KDLNAKFVLQV-------------YRDVVAT----NDQSFAKAVWPSVYTAVAYLDQFDKDEDGM 635

  Fly   487 ------------------VQGYAAKTVFEALQAPACHENMVKVGGYILGEFGNLIA----GDSRS 529
                              |..|.......||||.:...:       |:||  |.:|    .....
plant   636 IENEGFPDQTYDAWSVTGVSAYCGGLWVAALQAASAFAS-------IVGE--NAVAIYFNAKYEK 691

  Fly   530 APLVQFKLLHSKY 542
            |.:|..||.:..|
plant   692 AKIVYEKLWNGSY 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-2alphaNP_995607.1 Adaptin_N 40..603 CDD:396262 103/533 (19%)
Alpha_adaptinC2 730..839 CDD:197886
Alpha_adaptin_C 839..947 CDD:426707
AT4G10060NP_192744.6 COG4354 99..858 CDD:443491 103/533 (19%)
DUF608 493..853 CDD:461391 42/241 (17%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.