DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-2alpha and gba2

DIOPT Version :10

Sequence 1:NP_995607.1 Gene:AP-2alpha / 33211 FlyBaseID:FBgn0264855 Length:952 Species:Drosophila melanogaster
Sequence 2:XP_005172389.1 Gene:gba2 / 559240 ZFINID:ZDB-GENE-070522-3 Length:851 Species:Danio rerio


Alignment Length:130 Identity:31/130 - (23%)
Similarity:50/130 - (38%) Gaps:27/130 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MERAEGCEVVSPIDQSRGGKESEASADESLLFYCKSKEAEVKRINKELAN------------IRS 53
            |.|...||  |...:.|...|..::|.:.||:  ..|........:.|:|            :|:
Zfish   650 MARVLNCE--SVYQRYRDILERGSAAFDKLLW--NGKYYNYDSSGRSLSNSVMSDQCAGHWFLRA 710

  Fly    54 KFKGDKTLDGYQKKKYVCKLLFIFLLGHDIDF--GHMEAVNLL--------SSNKYSEKQIGYLF 108
            ...||.....:.|:|....|..:|.| :.:.|  |.|.|||.:        ||.:..|..:|.::
Zfish   711 SGLGDDEYQAFPKEKICSALKSVFDL-NVMSFAGGQMGAVNGMRPEGVPDRSSVQSDEVWVGVVY 774

  Fly   109  108
            Zfish   775  774

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-2alphaNP_995607.1 Adaptin_N 40..603 CDD:396262 20/91 (22%)
Alpha_adaptinC2 730..839 CDD:197886
Alpha_adaptin_C 839..947 CDD:426707
gba2XP_005172389.1 COG4354 105..840 CDD:443491 31/130 (24%)
DUF608 469..834 CDD:461391 31/130 (24%)
Blue background indicates that the domain is not in the aligned region.

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