DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AP-2alpha and ap2a2

DIOPT Version :9

Sequence 1:NP_995607.1 Gene:AP-2alpha / 33211 FlyBaseID:FBgn0264855 Length:952 Species:Drosophila melanogaster
Sequence 2:XP_031755830.1 Gene:ap2a2 / 407867 XenbaseID:XB-GENE-486024 Length:1011 Species:Xenopus tropicalis


Alignment Length:996 Identity:646/996 - (64%)
Similarity:761/996 - (76%) Gaps:84/996 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 CKSKEAEVKRINKELANIRSKFKGDKTLDGYQKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSNK 98
            |||||||:||||||||||||||||||.||||.|||||||||||||||||||||||||||||||||
 Frog    23 CKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSNK 87

  Fly    99 YSEKQIGYLFISVLVNTNSDLIRLIIQSIKNDLQSRNPVHVNLALQCIANIGSRDMAESFSNEIP 163
            |:||||||||||||||:||:|||||..:|||||.||||..:.|||.||||:|||:|||:|:.|||
 Frog    88 YTEKQIGYLFISVLVNSNSELIRLINNAIKNDLSSRNPTFMGLALHCIANVGSREMAEAFAGEIP 152

  Fly   164 KLLVSGDTMDVVKQSAALCLLRLFRSSPDIIPGGEWTSRIIHLLNDQHMGVVTAATSLIDALVKR 228
            ::||:|||||.||||||||||||:|:|||::...|||||::|||||||:||||||||||..|.::
 Frog   153 RILVAGDTMDSVKQSAALCLLRLYRTSPDLVLTNEWTSRVVHLLNDQHLGVVTAATSLITTLAQK 217

  Fly   229 NPDEYKGCVNLAVSRLSRIVTASYTDLQDYTYYFVPAPWLSVKLLRLLQNYNPVTEEAGVRARLN 293
            ||:|:|..|:|||||||||||::.|||||||||||||||||||||||||.| |..|:..||.||.
 Frog   218 NPEEFKTSVSLAVSRLSRIVTSASTDLQDYTYYFVPAPWLSVKLLRLLQCY-PPPEDPAVRGRLT 281

  Fly   294 ETLETILNKAQEPPKSKKVQHSNAKNAVLFEAINLIIHSDSEPNLLVRACNQLGQFLSNRETNLR 358
            |.|||||||||||||||||||||||||||||||:|||:.||||||||||||||||||.:||||||
 Frog   282 ECLETILNKAQEPPKSKKVQHSNAKNAVLFEAISLIIYHDSEPNLLVRACNQLGQFLQHRETNLR 346

  Fly   359 YLALESMCHLATSEFSHEEVKKHQEVVILSMKMEKDVSVRQMAVDLLYAMCDRGNAEEIVQEMLN 423
            ||||||||.||:||||||.||.|.|.||.::|.|:||||||.|||||||||||.||::||.|||:
 Frog   347 YLALESMCTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAQQIVAEMLS 411

  Fly   424 YLETADYSIREEMVLKVAILAEKYATDYTWYVDVILNLIRIAGDYVSEEVWYRVIQIVINREEVQ 488
            ||||||||||||:||||||||||||.|||||||.|||||||||||||||||||||||||||::||
 Frog   412 YLETADYSIREEIVLKVAILAEKYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINRDDVQ 476

  Fly   489 GYAAKTVFEALQAPACHENMVKVGGYILGEFGNLIAGDSRSAPLVQFKLLHSKYHLCSPMTRALL 553
            |||||||||||||||||||:||||||||||||||||||.||:||:||.|||||:||||..|||||
 Frog   477 GYAAKTVFEALQAPACHENLVKVGGYILGEFGNLIAGDPRSSPLIQFNLLHSKFHLCSVPTRALL 541

  Fly   554 LSTYIKFINLFPEIRTNIQDVFRQHSNLRSADAELQQRASEYLQLSIVASTDVLATVLEEMPSFP 618
            ||.|||||||||||:|.||||.|..|.||:||.||||||.|||:||.:||.|:|||||||||.||
 Frog   542 LSAYIKFINLFPEIKTTIQDVLRSDSQLRNADVELQQRAVEYLRLSSIASNDILATVLEEMPPFP 606

  Fly   619 ERESSILAVLKKKK-PGRVPE-NEIRESKS---------PAPLTSAAQ----------------- 655
            ||||||||.||||| |..|.: .|.::.||         .|||::..|                 
 Frog   607 ERESSILAKLKKKKGPSTVTDLEETKKEKSNSDLNGITEHAPLSTTQQPVFEDKATYAVRQRPLS 671

  Fly   656 --------NNALVNNSHSKL-------NNSNANTDLLGLSTPPSNNIGSGSNSNST--------L 697
                    :.:|.:.:..::       :..:.:.|||||..      .|||:|..|        |
 Frog   672 LLVPTLSSSQSLYSGTSHRVAALPFCQSTPSPSADLLGLGA------ASGSSSTPTTAPSAGSLL 730

  Fly   698 IDVLG--------------DMYGSN--------SNNNSSAVYNTK----KFLFKNNGVLFENEML 736
            :||..              |.:.|:        |.....:|.|.:    ||:.|||||||||::|
 Frog   731 VDVFAEPSLPVAAVTTEADDNFPSDVQTPLEGASGEPDPSVDNAEDFFDKFICKNNGVLFENQLL 795

  Fly   737 QIGVKSEFRQNLGRLGLFYGNKTQVPLTNFNPVLQWSAEDALKLNVQMKVVEPTLEAGAQIQQLL 801
            |||:||||||||||:.:|:|||......||...|..|.|.:..||:|.|..|||::.|||:||::
 Frog   796 QIGIKSEFRQNLGRMFIFFGNKMSSQFQNFTTTLICSDELSASLNLQSKPAEPTIDGGAQVQQVV 860

  Fly   802 TAECIEDYADAPTIEISFRYNGTQQKFSIKLPLSVNKFFEPTEMNAESFFARWKNLSGEQQRSQK 866
            ..||::::.|.|.:.|.|||.|..|..|:|||:::||||:|||||::.||.|||.||...|..||
 Frog   861 NVECVQEFTDLPLLNIQFRYGGAFQNVSVKLPITLNKFFQPTEMNSQDFFQRWKQLSSPNQEVQK 925

  Fly   867 VFKAAQPLDLPGARNKLMGFGMQLLDQVDPNPDNMVCAGIIHTQSQQVGCLMRLEPNKQAQMFRL 931
            :|||..|:|....:.:|:|||..::|.|||||.|.|.||||..:::|||||:|||||:||||:||
 Frog   926 IFKAKNPMDTDITKARLIGFGPAVMDNVDPNPSNYVAAGIIQAKTRQVGCLLRLEPNEQAQMYRL 990

  Fly   932 TVRASKETVTREICDLLTDQF 952
            |:|.|||.|::.:||||::||
 Frog   991 TIRTSKEEVSQTLCDLLSEQF 1011

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-2alphaNP_995607.1 Adaptin_N 40..598 CDD:279882 455/557 (82%)
Alpha_adaptinC2 730..839 CDD:197886 54/108 (50%)
Alpha_adaptin_C 839..947 CDD:280460 61/107 (57%)
ap2a2XP_031755830.1 Adaptin_N 29..591 CDD:396262 457/562 (81%)
HEAT repeat 332..355 CDD:293787 20/22 (91%)
HEAT repeat 369..398 CDD:293787 20/28 (71%)
HEAT repeat 408..434 CDD:293787 23/25 (92%)
Alpha_adaptinC2 789..892 CDD:197886 51/102 (50%)
Alpha_adaptin_C 898..1006 CDD:367023 61/107 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 906 1.000 Domainoid score I53
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5335
Inparanoid 1 1.050 1254 1.000 Inparanoid score I175
OMA 1 1.010 - - QHG53727
OrthoDB 1 1.010 - - D751651at2759
OrthoFinder 1 1.000 - - FOG0002465
OrthoInspector 1 1.000 - - otm49317
Panther 1 1.100 - - LDO PTHR22780
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1882
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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