DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-2alpha and ap2a1

DIOPT Version :9

Sequence 1:NP_995607.1 Gene:AP-2alpha / 33211 FlyBaseID:FBgn0264855 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_001090846.1 Gene:ap2a1 / 100038257 XenbaseID:XB-GENE-923183 Length:956 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-2alphaNP_995607.1 Adaptin_N 40..598 CDD:279882
Alpha_adaptinC2 730..839 CDD:197886
Alpha_adaptin_C 839..947 CDD:280460
ap2a1NP_001090846.1 Adaptin_N 29..591 CDD:279882
RIX1 141..>295 CDD:285390
HEAT repeat 332..355 CDD:293787
HEAT repeat 369..398 CDD:293787
HEAT repeat 408..434 CDD:293787
Alpha_adaptinC2 734..837 CDD:197886
Alpha_adaptin_C 843..951 CDD:280460
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 906 1.000 Domainoid score I53
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1254 1.000 Inparanoid score I175
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D751651at2759
OrthoFinder 1 1.000 - - FOG0002465
OrthoInspector 1 1.000 - - otm49317
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1882
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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