Protein Alignment al and RLT2

DIOPT Version :10

• Sequence 1: NP_722629.1
• Gene: al / 33208
• FlyBaseID: FBgn0000061
• Length: 408
• Species: Drosophila melanogaster
• Sequence 2: NP_199231.1
• Gene: RLT2 / 834441
• AraportID: AT5G44180
• Length: 1694
• Species: Arabidopsis thaliana
• Alignment Length: 341
• Identity: 74/341 - (21%)
• Similarity: 119/341 - (34%)
• Gaps: 107/341 - (31%)

  Fly    61 GGTNSPVSDGNSDCEADEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLT 125
            ||:.....:|   | ..|...|||.:      |:.|||.||..:|...||....|.:|::|:.|:
plant     3 GGSEKTTPEG---C-GGESKSKRKMK------TAAQLEVLENTYSAEPYPSEAIRADLSVKLNLS 57

  Fly   126 EARIQVWFQNRRAKWRK---------QEKVGPQS-HPYNPYLPGGAATMQTVVGAALPPNPFTHL 180
            :.::|:||.:||.|.||         :|.|.|.: ..:.|.:..|    ..|.|..|
plant    58 DRQLQMWFCHRRLKERKSTTPSKRQRKELVTPTAMESWEPPVNAG----DLVAGNEL-------- 110

  Fly   181 GFQLRKPFDAQHAAN-------LAAFRYPHLSAAPMIPSGYFNQFQRAPPHMLPHG-MAGMYSPS 237
                    |::.||.       ....|:...|:|.:...||..  .:....:..:| :.||
plant   111 --------DSRRAARGSGGSGVTVVRRFNEPSSAEVRAIGYVE--AQLGERLRDNGPVLGM---- 161

  Fly   238 SSFQSLLANMTAVPRGTPLGKPPALLVGSPDLHSPNHMLAS-----------PPTSPASGHASQH 291
             .|..|               ||... |.| :..|:|..|:           ....|...|....
plant   162 -EFDPL---------------PPGAF-GMP-IEMPSHRKATRQAFETNIYVRSDVKPIKDHVRPI 208

  Fly   292 QQHPTAHPPPPQAPPQMPVG--VQPAQLSPQHLVGIALTQQASSLSPTQTSPVALTLSHSPQRQL 354
            :::        |..|::|..  ....::||.|..|:.|......:|       |::..|....::
plant   209 REY--------QFIPELPSSRTDHSERVSPSHHFGVPLDGSVMRVS-------AVSAGHRDDYKI 258

  Fly   355 PP-------PSHQAPP 363
            .|       .:||..|
plant   259 SPQIPNLNLATHQGKP 274

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
al	NP_722629.1	Homeodomain	86..142	CDD:459649	19/55 (35%)
		OAR	374..391	CDD:461067
RLT2	NP_199231.1	Homeodomain	18..74	CDD:459649	22/61 (36%)
		DUF5401	<322..>457	CDD:375164
		DDT	515..570	CDD:460696
		HARE-HTH	696..765	CDD:461541
		WHIM1	899..941	CDD:464774
		WSD	1071..1145	CDD:464775