DRSC/TRiP Functional Genomics Resources

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Protein Alignment al and uncx

DIOPT Version :10

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:XP_005164261.1 Gene:uncx / 798510 ZFINID:ZDB-GENE-080509-1 Length:483 Species:Danio rerio


Alignment Length:384 Identity:105/384 - (27%)
Similarity:145/384 - (37%) Gaps:119/384 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LAHPDAVVLVDRAPGSSAASAGAALTVSMSVSGGAPSGASGASGGTNSPVSDG---NSD------ 73
            |:|.....|......|:||       |..|:.|......:.:...:|..:|.|   |.|      
Zfish    28 LSHHHVYELAGHQLQSTAA-------VPFSIDGLLNGSCTASVVNSNPLLSSGCGMNGDNQQYKL 85

  Fly    74 ---CEADEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQN 135
               .:.|:.:|..|:||.||.||.:|||||||||:.:||||||.||.||:::.|.|:|:||||||
Zfish    86 TDSGDPDKDSPGCKRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLIESRVQVWFQN 150

  Fly   136 RRAKWRKQE--KVGP-----QSHPYNPYLPGGAATMQTVVGAALPPNPFTHLGFQ-LRKPFDAQH 192
            |||||||:|  |.||     .|||            .|..|..:.|........: |.|....|.
Zfish   151 RRAKWRKKENTKKGPGRPAHNSHP------------TTCSGEPMDPEEIARRELERLEKKKRKQE 203

  Fly   193 AANLAAFRYPHLSAAPMIPSGYFNQFQRAPPHMLPHGMAGMYSPSSSFQSLLANMTAVPRGTPLG 257
            ...|.       |...::|...|                  ::|.|...|.|:.:|         
Zfish   204 RRLLK-------SQNKLLPGDLF------------------HTPGSDSDSGLSQIT--------- 234

  Fly   258 KPPALLVGSPDLHSPNHMLASPPTSPASGHA--SQHQQHPTAHPPPPQAPPQMPVGVQPAQLSPQ 320
                                   .|..|.|.  .::|..|:.        .|.|..:|..:.:.|
Zfish   235 -----------------------DSEQSLHCDMGRNQTQPSC--------DQTPQKLQNQRNADQ 268

  Fly   321 HLVGIALT-----QQASSLSPTQTS--------PVALTLSHSPQRQLPPPSHQAPPPPP 366
            ...|..|.     ||::..|.:::|        .|...||.|..|:.||.....|.|.|
Zfish   269 DASGSELDSSDSGQQSNLCSNSRSSALQKLNPFSVESLLSDSRPRRKPPMDFPVPTPRP 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeodomain 86..142 CDD:459649 39/55 (71%)
OAR 374..391 CDD:461067
uncxXP_005164261.1 COG5576 <88..208 CDD:227863 57/131 (44%)
Homeodomain 101..157 CDD:459649 39/55 (71%)
Blue background indicates that the domain is not in the aligned region.

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