DRSC/TRiP Functional Genomics Resources

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Protein Alignment al and RHOXF2B

DIOPT Version :10

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_001093155.1 Gene:RHOXF2B / 727940 HGNCID:33519 Length:288 Species:Homo sapiens


Alignment Length:256 Identity:69/256 - (26%)
Similarity:102/256 - (39%) Gaps:63/256 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGISEEIKLEELPQEAKLAHPDAVVLVDRAPGSSAASAGAALTVSMSVSGG---------APSGA 56
            :.::||:|.||   |.....|:.    ..|.|....||||        .||         ...|.
Human    33 LSLTEEVKEEE---EDAQPEPEQ----GTAAGEKLKSAGA--------QGGEEKDGGGEEKDGGG 82

  Fly    57 SGASG--------GTNSPVSDGN-SDCEADEYAPKRKQRRYR----------------TTFTSFQ 96
            :|..|        ||:.  |||| .|.:..|..|.::..|.:                ..||..|
Human    83 AGVPGHLWEGNLEGTSG--SDGNVEDSDQSEKEPGQQYSRPQGAVGGLEPGNAQQPNVHAFTPLQ 145

  Fly    97 LEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQEKVGPQSHPYNPYLPGGA 161
            |:|||..|.|..:|..|.|..||..:.:||..:|:||:|||||||:.:: ...:....|::..|.
Human   146 LQELECIFQREQFPSEFLRRRLARSMNVTELAVQIWFENRRAKWRRHQR-ALMARNMLPFMAVGQ 209

  Fly   162 ATMQTVVGAALPPNPFTHLGFQLRKPFDAQHAANLA---------AFRYPHLSAAPMIPSG 213
            ..|.|...|...|...:  |.:....:|..|:::|.         :...|.:...||.|:|
Human   210 PVMVTAAEAITAPLFIS--GMRDDYFWDHSHSSSLCFPMPPFPPPSLPLPLMLLPPMPPAG 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeodomain 86..142 CDD:459649 26/71 (37%)
OAR 374..391 CDD:461067
RHOXF2BNP_001093155.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..136 28/119 (24%)
Homeodomain 139..191 CDD:459649 25/51 (49%)
PRK02287 <183..>232 CDD:235024 14/51 (27%)
Nuclear localization signal. /evidence=ECO:0000250 186..195 5/9 (56%)
Blue background indicates that the domain is not in the aligned region.

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