DRSC/TRiP Functional Genomics Resources

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Protein Alignment al and SHOX

DIOPT Version :10

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_000442.1 Gene:SHOX / 6473 HGNCID:10853 Length:292 Species:Homo sapiens


Alignment Length:351 Identity:96/351 - (27%)
Similarity:121/351 - (34%) Gaps:169/351 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 VSDGNSDC---------EADEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKI 122
            |::|..:|         |.::...|.||||.||.||..||.|||:.|..|||||.|.||||:.::
Human    90 VAEGIYECKEKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRL 154

  Fly   123 GLTEARIQVWFQNRRAKWRKQEKVGPQSHPYNPYLPGGAATMQTVVGAALPPNPFTHLGFQLRKP 187
            ||:|||:||||||||||.||||.   |.|            ...::|.|      .||       
Human   155 GLSEARVQVWFQNRRAKCRKQEN---QMH------------KGVILGTA------NHL------- 191

  Fly   188 FDAQHAA---NLAAFRYPHLSAAPMIPSGYFNQFQ---------RAPPHMLPHGMAGMYSPSSSF 240
             ||...|   |:.|.|.|            |.|.|         .|.||:.||..|         
Human   192 -DACRVAPYVNMGALRMP------------FQQVQAQLQLEGVAHAHPHLHPHLAA--------- 234

  Fly   241 QSLLANMTAVPRGTPLGKPPALLVGSPDLHSPNHMLASPPTSPASGHASQHQQHPTAHPPPPQAP 305
                                         |:|..|.                      ||||.. 
Human   235 -----------------------------HAPYLMF----------------------PPPPFG- 247

  Fly   306 PQMPVGVQPAQLSPQHLVGIALTQQASSLSPTQTSPVALTLSHSPQRQLPPPSHQAPPPPPRAAT 370
              :|:.              :|.:.||:.:..                              ||.
Human   248 --LPIA--------------SLAESASAAAVV------------------------------AAA 266

  Fly   371 PPEDRRTSSIAALRLKAREHELKLEL 396
            ...:.:.||||.||||||:|...|.|
Human   267 AKSNSKNSSIADLRLKARKHAEALGL 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeodomain 86..142 CDD:459649 37/55 (67%)
OAR 374..391 CDD:461067 10/16 (63%)
SHOXNP_000442.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 100..119 4/18 (22%)
Homeodomain 118..174 CDD:459649 37/55 (67%)
SH3-binding. /evidence=ECO:0000255 242..249 4/9 (44%)
OAR 272..288 CDD:461067 11/15 (73%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 274..287 10/12 (83%)
Blue background indicates that the domain is not in the aligned region.

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