DRSC/TRiP Functional Genomics Resources

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Protein Alignment al and PAX3

DIOPT Version :9

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_852124.1 Gene:PAX3 / 5077 HGNCID:8617 Length:505 Species:Homo sapiens


Alignment Length:384 Identity:111/384 - (28%)
Similarity:150/384 - (39%) Gaps:118/384 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GISEEIKLEEL---PQEAKLAHPDAVVLVDRAPGSSAASAGAALTVSMSVSGGAPSGASGASGGT 63
            |..||..||..   ..|.|..|....:|.:||                                 
Human   165 GEEEEADLERKEAEESEKKAKHSIDGILSERA--------------------------------- 196

  Fly    64 NSPVSDGNSDCEADEYAP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEA 127
            ::|.||..||.:::...| ||||||.|||||:.||||||:||.||||||::||||||.:..||||
Human   197 SAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEA 261

  Fly   128 RIQVWFQNRRAKWRKQEKVGPQSHPYNPYLPGGAATMQTVVGAALPPNPFTHLGFQLRKPFDAQH 192
            |:||||.||||:||||.... |...:|..:|||           .||                  
Human   262 RVQVWFSNRRARWRKQAGAN-QLMAFNHLIPGG-----------FPP------------------ 296

  Fly   193 AANLAAFRYPHLSAAPMIPSGYFNQFQRAPPHMLPHGMAGMYSPSSSFQSLLANMTAVPRGTPLG 257
                        :|.|.:|:...::..              |.|:|..|::....:.|.|..|| 
Human   297 ------------TAMPTLPTYQLSETS--------------YQPTSIPQAVSDPSSTVHRPQPL- 334

  Fly   258 KPPALLVGSPDLHSPNHMLASPPTSPASGHASQHQQHPTAHPPPPQAPPQMPVGVQPAQLSPQHL 322
             ||:.:..|....:|:.  :|....|::.|...........|..|..|....:|   ..|||| :
Human   335 -PPSTVHQSTIPSNPDS--SSAYCLPSTRHGFSSYTDSFVPPSGPSNPMNPTIG---NGLSPQ-V 392

  Fly   323 VGI---------------ALTQQASSLSPTQTSPVALT--LSHSPQRQLPPPSHQAPPP 364
            :|:               ||:.....|.||.|...:.:  |.|.......|.|....||
Human   393 MGLLTNHGGVPHQPQTDYALSPLTGGLEPTTTVSASCSQRLDHMKSLDSLPTSQSYCPP 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeobox 89..141 CDD:278475 38/51 (75%)
OAR 374..391 CDD:281777
PAX3NP_852124.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
PAX 34..159 CDD:128645
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 37..93
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 113..161
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 165..228 27/95 (28%)
Homeobox 222..276 CDD:395001 39/53 (74%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 309..351 12/59 (20%)
Pax7 347..391 CDD:403540 10/48 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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