DRSC/TRiP Functional Genomics Resources

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Protein Alignment al and OTX2

DIOPT Version :10

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_068374.1 Gene:OTX2 / 5015 HGNCID:8522 Length:297 Species:Homo sapiens


Alignment Length:248 Identity:72/248 - (29%)
Similarity:106/248 - (42%) Gaps:60/248 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 SDCEADEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNR 136
            :.|.|   |..|||||.|||||..||:.||..|::|.|||:|.|||:|:||.|.|:|:||||:||
Human    36 ASCPA---ATPRKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNR 97

  Fly   137 RAKWRKQE---------KVGPQSHPYNP-------------YLPGGAATMQTVVGAALPPNPFTH 179
            |||.|:|:         ||.|.....:|             :.|..:.::.|:..::.|.:.::.
Human    98 RAKCRQQQQQQQNGGQNKVRPAKKKTSPAREVSSESGTSGQFTPPSSTSVPTIASSSAPVSIWSP 162

  Fly   180 LGFQ-LRKPFDAQHAANLAAFRYPHLSAAPMIPSGYFNQFQRAPPHMLPHGMAGMYSPSSSFQSL 243
            .... |..|.....:....::...:..|     |||            ..|.||   .:|.|..:
Human   163 ASISPLSDPLSTSSSCMQRSYPMTYTQA-----SGY------------SQGYAG---STSYFGGM 207

  Fly   244 LANMTAVPRGTPLGKPPALLVGSPDLHSP-------NHMLASPPTSPASGHAS 289
            .......|....|..|.|.|       ||       :|:..||.:....|:.:
Human   208 DCGSYLTPMHHQLPGPGATL-------SPMGTNAVTSHLNQSPASLSTQGYGA 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeodomain 86..142 CDD:459649 35/55 (64%)
OAR 374..391 CDD:461067
OTX2NP_068374.1 Homeodomain 47..102 CDD:459649 35/54 (65%)
TF_Otx 161..242 CDD:427350 19/107 (18%)
Blue background indicates that the domain is not in the aligned region.

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