DRSC/TRiP Functional Genomics Resources

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Protein Alignment al and alx4b

DIOPT Version :10

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_001297007.2 Gene:alx4b / 497424 ZFINID:ZDB-GENE-050208-140 Length:364 Species:Danio rerio


Alignment Length:419 Identity:107/419 - (25%)
Similarity:148/419 - (35%) Gaps:191/419 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SEEIKLEELPQEAKLAHPDAVVLVDRAPGSSAASAGAALT---VSMSVSGGAPSGA------SGA 59
            ||:.|||                 |.|..|.....|..||   :..|....|..|:      :|.
Zfish    97 SEDSKLE-----------------DGALISCYGKDGTGLTDTDMPQSADPTALDGSFISVKDAGL 144

  Fly    60 SGGTNSPVSD-GNSDCEADEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIG 123
            .|.::.|||| |::..:::..:.|.|:||.||||||:|||||||.|.:||||||:.||:||::..
Zfish   145 KGQSDRPVSDIGSALDKSEAESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTD 209

  Fly   124 LTEARIQVWFQNRRAKWRKQEKVG--------------------PQSHP--YNPYLPGGAATMQT 166
            |||||:|||||||||||||:|:.|                    |:::.  .||....|:::...
Zfish   210 LTEARVQVWFQNRRAKWRKRERFGQMQQVRTHFSTAYELPLLTRPENYAQIQNPSWLSGSSSASP 274

  Fly   167 VVGAALPPNPFTHLGFQLRKPFDAQHAANLAAFRYPHLSAAPMIPSGYFNQFQRAPPHMLPHGMA 231
            |.|..:|                   ...:::...||                       ||..:
Zfish   275 VPGCVVP-------------------CDTVSSCMTPH-----------------------PHSAS 297

  Fly   232 GMYSPSSSFQSLLANMTAVPRGTPLGKPPALLVGSPDLHSPNHMLASPPTSPASGHASQHQQHPT 296
            |:    |.|               ||.|                      ||....|..|.    
Zfish   298 GV----SDF---------------LGMP----------------------SPGGSMAQTHM---- 317

  Fly   297 AHPPPPQAPPQMPVGVQPAQLSPQHLVGIALTQQASSLSPTQTSPVALTLSHSPQRQLPPPSHQA 361
                              ..|.....||..:.....|:.|                         
Zfish   318 ------------------GSLFGSSGVGGTINGFDLSVEP------------------------- 339

  Fly   362 PPPPPRAATPPEDRRTSSIAALRLKAREH 390
                        ||::||||:||:||:||
Zfish   340 ------------DRKSSSIASLRMKAKEH 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeodomain 86..142 CDD:459649 42/55 (76%)
OAR 374..391 CDD:461067 12/17 (71%)
alx4bNP_001297007.2 None

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