Protein Alignment al and sv

DIOPT Version :10

• Sequence 1: NP_722629.1
• Gene: al / 33208
• FlyBaseID: FBgn0000061
• Length: 408
• Species: Drosophila melanogaster
• Sequence 2: NP_524633.3
• Gene: sv / 43825
• FlyBaseID: FBgn0005561
• Length: 844
• Species: Drosophila melanogaster
• Alignment Length: 343
• Identity: 71/343 - (20%)
• Similarity: 104/343 - (30%)
• Gaps: 117/343 - (34%)

  Fly    32 GSSAASAG--------AALTVSMSVSGGAPSGASGASGGTNS-----PVSDGNSDCEADEYAPKR 83
            ||.|.::|        :..|:|.:.| ...:.|.|.|.||.|     |:|.......|:....:.
  Fly   521 GSGATASGNDTSMLYDSITTISQTQS-SIYTPAIGPSIGTGSLTPLVPISMHEMKLSANSIQEQT 584

  Fly    84 KQRRYR--------TTFTSFQLEELEKAFSRTH-------------------YPDVFTREELAMK 121
            ....|.        |:.||  ||.......:.|                   .||:.......:|
  Fly   585 VPPFYTALAFDGNYTSMTS--LENCSSLVGQEHIVMPESSDSNTLCPISTRIVPDITETNSTRVK 647

  Fly   122 IGLTEARIQVWFQNRRAKWRKQEKVGPQSHPYNPYLPGGAATMQTVVGAALPPNPFTHLG-FQLR 185
            ..||.:  ....::...:..|........|..:|:|                    .|:| .|||
  Fly   648 EPLTNS--DGCSEDNNKEPEKSNSSQSSDHIASPHL--------------------HHIGEEQLR 690

  Fly   186 KPFDAQHAANLAAFRYPHLSAAPMIPSGYFNQF------QRAPPHMLPHGMAGMYSPSS---SFQ 241
                ....:||.|..:|. |..|:.|||..:..      .|:...:......|:||..:   ||.
  Fly   691 ----GNRRSNLNASTHPS-SLIPLQPSGGSSLLNINPSENRSDVELNLSNNVGLYSTPTVLPSFN 750

  Fly   242 SLLANMTAVPRGTPLGKPPAL-----------------LVGSP--------------DLHSP--- 272
            ...|..::|..|:.....||.                 |:.|.              ||.||
  Fly   751 HYSAGCSSVVPGSDYAYNPAYTQYGGAYGSYGYGTGSGLINSSYYYESGQTQSPLTHDLRSPLVA 815

  Fly   273 --NHMLASPPTSPASGHA 288
              .:.||| ..||.||.|
  Fly   816 TRANSLAS-AASPGSGSA 832

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
al	NP_722629.1	Homeodomain	86..142	CDD:459649	12/82 (15%)
		OAR	374..391	CDD:461067
sv	NP_524633.3	PAX	175..299	CDD:128645