DRSC/TRiP Functional Genomics Resources

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Protein Alignment al and zfh1

DIOPT Version :10

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_733401.3 Gene:zfh1 / 43650 FlyBaseID:FBgn0004606 Length:1206 Species:Drosophila melanogaster


Alignment Length:542 Identity:111/542 - (20%)
Similarity:151/542 - (27%) Gaps:245/542 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 SPVSDGNSDCEAD-EYAPKR----KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREE---LAMK 121
            |...:...|.|.| |..|::    ::.|.||.....|.::|::.:|....|   :|:|   :|.:
  Fly   674 SASEEDEEDEEMDVEEEPRQESGERKVRVRTAINEEQQQQLKQHYSLNARP---SRDEFRMIAAR 735

  Fly   122 IGLTEARIQVWFQNRRAKWR------------------------------------KQEKVGPQS 150
            :.|....:||||||.|::.|                                    |::.:.|:|
  Fly   736 LQLDPRVVQVWFQNNRSRERKMQSFQNNQAAGAAPPMPIDSQASLTREDQPLDLSVKRDPLTPKS 800

  Fly   151 HPYNPYL--PGGAA-------------TMQTVVGAALPPNPFTHLGFQLRKPFDAQHAANLAAFR 200
            ....||:  |.|.|             |..::..|::.|:....|.|....|....::       
  Fly   801 ESSPPYIAPPSGEALNPEAINLSRKFSTSASMSPASISPSSAAALYFGAAPPPSPPNS------- 858

  Fly   201 YPHLSAAPMIPSGYFNQFQRAPPHMLPHG--MAGMYS--PSSSFQS--LLANMTAVP--RGTPLG 257
              .|.:.|.  ||  ..|...||:|||..  |..::.  |...|.|  .|.|...:|  |||.|.
  Fly   859 --QLDSTPR--SG--QAFPGLPPYMLPMSLPMEALFKMRPGGDFASNHALMNSIKLPDYRGTSLS 917

  Fly   258 ---------------------------KPPALL---------VGSPDL----------------- 269
                                       .||...         .|.|||                 
  Fly   918 PGGSEKRSWRDDDSRISHEDEFGAGVLMPPKPRRGKAETHGHAGDPDLPYVCDQCDKAFAKQSSL 982

  Fly   270 --------------------------HSPNHMLASPPTSP-----------ASGHASQHQQH--- 294
                                      |...|........|           .||..|||..|   
  Fly   983 ARHKYEHSGQRPYQCIECPKAFKHKHHLTEHKRLHSGEKPFQCSKCLKRFSHSGSYSQHMNHRYS 1047

  Fly   295 ---------------PTAHP-PPPQAPP-----------QMPVGVQPAQLSPQ-----HLVGIAL 327
                           ||..| ..|.|||           |:|.|..|.....|     ||..:|.
  Fly  1048 YCKPYREXVSDTSVPPTCQPGANPLAPPAMASNRGRRRVQVPAGNPPYTPHHQHPHHPHLAAMAA 1112

  Fly   328 TQQASSLSPTQ--------------TSPVALTLSHSPQRQLPPP----------------SHQA- 361
            .||.......|              ..|.....:|.|....|||                .|.| 
  Fly  1113 FQQQHQQQQQQHQHHRLSWNGGGVMLPPPPSQQAHRPTAPHPPPLLSGSGFGQPPAAQFFHHHAG 1177

  Fly   362 --PPPPPRAATPPEDRRTSSIA 381
              |||||    ||:...||:.|
  Fly  1178 LLPPPPP----PPQTTPTSAPA 1195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeodomain 86..142 CDD:459649 19/94 (20%)
OAR 374..391 CDD:461067 3/8 (38%)
zfh1NP_733401.3 C2H2 Zn finger 291..311 CDD:275368
C2H2 Zn finger 326..346 CDD:275368
zf-H2C2_2 338..365 CDD:463886
zf-C2H2 355..377 CDD:395048
C2H2 Zn finger 357..377 CDD:275368
zf-H2C2_2 369..391 CDD:463886
Homeodomain 701..756 CDD:459649 18/57 (32%)
C2H2 Zn finger 969..989 CDD:275368 0/19 (0%)
zf-H2C2_2 981..1006 CDD:463886 0/24 (0%)
C2H2 Zn finger 997..1017 CDD:275368 2/19 (11%)
zf-H2C2_2 1009..1034 CDD:463886 3/24 (13%)
C2H2 Zn finger 1025..1042 CDD:275368 4/16 (25%)
Blue background indicates that the domain is not in the aligned region.

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