DRSC/TRiP Functional Genomics Resources

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Protein Alignment al and Rhox2g

DIOPT Version :10

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_001107625.1 Gene:Rhox2g / 434766 MGIID:3648776 Length:191 Species:Mus musculus


Alignment Length:186 Identity:41/186 - (22%)
Similarity:66/186 - (35%) Gaps:70/186 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VDRAPGSSAASAGAALTVSMSVSG----------GAP-SGASGA---------SGGTNSPVSD-- 69
            :|..|.....:|....|:.:.::|          |.| ||.|.|         :||..:||:|  
Mouse    10 LDVGPEEDEENANGIKTLMVLLAGEGRNEGESGRGLPGSGVSAAEGYRAGELSAGGLAAPVADLM 74

  Fly    70 --------GNSDCEADEYAPKRKQ------------------------------------RRYRT 90
                    |.:.|..:    |.||                                    ..::.
Mouse    75 DNNNQEDLGATGCAQE----KEKQPEEPVPDSMGDLENVKPMSGPWSTVNPVRVLVPEFLHGWQQ 135

  Fly    91 TFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQEKV 146
            :|...||:|||..|...||......:.||..:|:::|.:|.||..||.|:|..:::
Mouse   136 SFNVLQLQELESIFQCNHYISTTEAKCLARSMGVSKATVQEWFLKRREKYRSYKRL 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeodomain 86..142 CDD:459649 19/55 (35%)
OAR 374..391 CDD:461067
Rhox2gNP_001107625.1 homeodomain 134..186 CDD:238039 19/51 (37%)
Blue background indicates that the domain is not in the aligned region.

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