DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment al and ftz

DIOPT Version :10

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster


Alignment Length:220 Identity:60/220 - (27%)
Similarity:87/220 - (39%) Gaps:36/220 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RAPGSSAASAGAALTVSMSVSGGAPSGASGASGGTNSPVSDG-NSDCEADEYAPKRKQRRYRTTF 92
            ::||..::||     ||..::....:..:||.....|.:.:. .|||        :..:|.|.|:
  Fly   210 QSPGEKSSSA-----VSQEINHRIVTAPNGAGDFNWSHIEETLASDC--------KDSKRTRQTY 261

  Fly    93 TSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQEKVGPQSHP----- 152
            |.:|..||||.|....|.....|.::|..:.|:|.:|::||||||.|.:|...:  .|.|     
  Fly   262 TRYQTLELEKEFHFNRYITRRRRIDIANALSLSERQIKIWFQNRRMKSKKDRTL--DSSPEHCGA 324

  Fly   153 -YNPYLPGGAATMQTVVGAALPPNPFTHLGFQLRKPFDAQHAANLAAFRYPHLSAAPMIPSGYFN 216
             |...||...||.....||...|.|..|            |....||  ||..|.:.....|..|
  Fly   325 GYTAMLPPLEATSTATTGAPSVPVPMYH------------HHQTTAA--YPAYSHSHSHGYGLLN 375

  Fly   217 QFQRAPPHMLPHGMAGMYSPSSSFQ 241
            .:.:...|.........|....|:|
  Fly   376 DYPQQQTHQQYDAYPQQYQHQCSYQ 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeodomain 86..142 CDD:459649 23/55 (42%)
OAR 374..391 CDD:461067
ftzNP_477498.1 FTZ 1..248 CDD:397787 9/42 (21%)
Homeodomain 255..311 CDD:459649 23/55 (42%)
KLF1_2_4_N <321..404 CDD:425360 22/94 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.