DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment al and PHOX2A

DIOPT Version :9

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_005160.2 Gene:PHOX2A / 401 HGNCID:691 Length:284 Species:Homo sapiens


Alignment Length:316 Identity:97/316 - (30%)
Similarity:119/316 - (37%) Gaps:120/316 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 SMSVSGGAPSGASGASGGTN-SPVSD------------GNSDC---------------------- 74
            :|..|.....||....||.. ||:..            |:|:|                      
Human    15 AMEASAYGDFGACSQPGGFQYSPLRPAFPAAGPPCPALGSSNCALGALRDHQPAPYSAVPYKFFP 79

  Fly    75 EADEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAK 139
            |......||||||.||||||.||:|||:.|:.|||||::||||||:||.|||||:||||||||||
Human    80 EPSGLHEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAK 144

  Fly   140 WRKQEKVGPQSHPYNPYLPGGAATMQTVVGAA------------------------------LPP 174
            :||||:               ||:.:...|||                              |||
Human   145 FRKQER---------------AASAKGAAGAAGAKKGEARCSSEDDDSKESTCSPTPDSTASLPP 194

  Fly   175 NPFTHLGFQLRKPFDAQHAANLAAFRYPHLSAAPMIPSGYFNQFQRAPPHMLPHGMAGMYSPSSS 239
            .|                |..||:   |.||.:|                 ||..:.....|...
Human   195 PP----------------APGLAS---PRLSPSP-----------------LPVALGSGPGPGPG 223

  Fly   240 FQSLLANMTAVPRGTPLGKPPALLVGSPDLHSPNHMLASPPTSPASGHASQHQQHP 295
            .|.|...:.|...|...|.|.|   |:.:|........|.| .|.||..|...:.|
Human   224 PQPLKGALWAGVAGGGGGGPGA---GAAELLKAWQPAESGP-GPFSGVLSSFHRKP 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeobox 89..141 CDD:278475 40/51 (78%)
OAR 374..391 CDD:281777
PHOX2ANP_005160.2 Homeobox 94..147 CDD:365835 40/52 (77%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..284 39/186 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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