DRSC/TRiP Functional Genomics Resources

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Protein Alignment al and mix1

DIOPT Version :10

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_988848.1 Gene:mix1 / 394439 XenbaseID:XB-GENE-485898 Length:357 Species:Xenopus tropicalis


Alignment Length:339 Identity:95/339 - (28%)
Similarity:124/339 - (36%) Gaps:101/339 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 SGGTNSPVSD-------GNSDCEADEYAP-----KRKQRRYRTTFTSFQLEELEKAFSRTHYPDV 112
            :|...|||.:       |:.:.:.....|     ...|||.||.||..||:.||:.|....|||:
 Frog    50 AGSEQSPVQNIRTKDTMGSKETDPRNPVPDASLLPASQRRKRTFFTQAQLDILEQFFQTNMYPDI 114

  Fly   113 FTREELAMKIGLTEARIQVWFQNRRAKWRKQEKVGPQSHPYNPYLPG-------GAATMQTVVGA 170
            ..|||||..|.:.|:||||||||||||.|:|   |.::  ..|.|.|       ||.  :::..:
 Frog   115 HHREELARHIYIPESRIQVWFQNRRAKVRRQ---GAKA--TKPVLAGHHYSSTFGAT--RSMFPS 172

  Fly   171 ALPPNPFTHLGFQLRKPFDAQHAANLAAFRYPHLSAAPMIPS--GYFNQFQRAPPH--------- 224
            |..||..:|       |.....|           .|.||..|  ..|:|.|...|:         
 Frog   173 APAPNSSSH-------PMATARA-----------QAQPMKDSQANKFHQSQGFLPYPDSSCDVSR 219

  Fly   225 ---MLPHGMAGMYS-PSSSFQSLLANMTAVPRGTPLGKPPALLVGSPDLHS------------PN 273
               :|.....|.|. |.:|  |.:.|..        |||...|.....|::            |.
 Frog   220 QRFLLSQATPGTYHLPQTS--SNIYNQN--------GKPHIPLWNQQPLYTDMMEKVLDLSRRPE 274

  Fly   274 HMLASPPTSPASG-------HAS---QHQQHPTAHPPPPQAPPQMPV--GVQPAQLSPQHLVGIA 326
            .|...|..|..:.       |.|   .|..|.:..  ..|.|..||.  |.....:||....|: 
 Frog   275 QMPVQPMYSTQTHKNIKSVVHGSTTLSHHSHMSLF--ANQDPCNMPTTQGGTYGHVSPISDSGV- 336

  Fly   327 LTQQASSLSPTQTS 340
                 |..||..||
 Frog   337 -----SDTSPEPTS 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeodomain 86..142 CDD:459649 33/55 (60%)
OAR 374..391 CDD:461067
mix1NP_988848.1 Homeodomain 88..144 CDD:459649 33/55 (60%)
Blue background indicates that the domain is not in the aligned region.

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