DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment al and toe

DIOPT Version :9

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster


Alignment Length:446 Identity:113/446 - (25%)
Similarity:163/446 - (36%) Gaps:164/446 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 HP--DAVVLVDRAPGSSAASAGAALTVSMS----------------------------VSGGAPS 54
            ||  .||.|. ..||...|.||.||....|                            .:.|:..
  Fly   269 HPLWGAVPLA-TPPGGGPAGAGGALQPGGSGSSYGSDGNMSSNPNSSNSNTTHSNGHNTNSGSGC 332

  Fly    55 GASGASGG---------------TNSPVSDGN-------SDCEADEYAPKRKQRRYRTTFTSFQL 97
            |.|.|..|               :.||.:|.|       .|.|:.: :.:.|.||.||||:..||
  Fly   333 GDSSAGSGRLSLPALSPDSGSRDSRSPDADANRMIDIEGEDSESQD-SDQPKFRRNRTTFSPEQL 396

  Fly    98 EELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQEKVGPQSHPYNPYLPGGAA 162
            :||||.|.::|||.|.|||:||.:..|:|||:||||.|||||||:.::|.......:|.......
  Fly   397 DELEKEFDKSHYPCVNTREKLAARTALSEARVQVWFSNRRAKWRRHQRVNLIKQRDSPSTSSSPT 461

  Fly   163 TMQTVVGAALPPNPFTHLGFQLRKPFDAQHAANLAAFRYPHLSAAPMIPSGYFNQFQRAPPHMLP 227
            .:...|.:.:.|.|                        .|...|.|  .||     |:..|:  |
  Fly   462 PLVNPVVSPVSPIP------------------------VPVPVAVP--ESG-----QQKQPY--P 493

  Fly   228 HGMAGMYSPSSSFQSLLANMTAVPRGTPLGKPPALLVGSPDLHSPNHMLASPPTSPASGHASQHQ 292
            :..:.|.:.|||      :..:.|..|               .:|...::|..:|.:|   :||.
  Fly   494 YSTSNMCNTSSS------SSNSQPCNT---------------INPGSKMSSKTSSVSS---NQHM 534

  Fly   293 QHPTAHPPPPQAPPQMPVGVQPAQLSPQHLVGIALTQQASSLSPTQTSPVALTLSHSPQRQLPPP 357
            :.|.|                                ..::.|||.::|:::...:|..|.||..
  Fly   535 EEPAA--------------------------------AVATASPTASAPLSMGGENSAFRALPMT 567

  Fly   358 SHQAPPPPPRAATPPEDRRTSSIAALRLK-AREHELK-----LELLRQNGHGNDVV 407
            .       |...|.|    |:|.||..|. ||::..|     |.|    |||:..:
  Fly   568 L-------PMPMTLP----TASAAAFALSFARQYIAKYMGTPLNL----GHGSSPI 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeobox 89..141 CDD:278475 33/51 (65%)
OAR 374..391 CDD:281777 7/17 (41%)
toeNP_524041.2 HTH 134..230 CDD:304362
Homeobox 388..440 CDD:278475 33/51 (65%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450822
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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