DRSC/TRiP Functional Genomics Resources

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Protein Alignment al and otp

DIOPT Version :10

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_001286654.1 Gene:otp / 37364 FlyBaseID:FBgn0015524 Length:416 Species:Drosophila melanogaster


Alignment Length:412 Identity:122/412 - (29%)
Similarity:173/412 - (41%) Gaps:122/412 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ELPQEAKLA-H---------PDAVVLVDRAPGSSAASAGAALTVS-----MSVSGG------APS 54
            :||:.|..| |         |....|.|...|:....:...:.|.     :.:|||      |.:
  Fly    16 DLPKAALTALHAGVNSFGQLPVGPNLADLGGGAGGGGSSGGVPVGGGVARLHISGGLCDNSNALN 80

  Fly    55 GASGASGGTNSPVSDG-----NSDCEADEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFT 114
            |.:|:||..|...::|     ||..:.|::..|.||:|:||.||..||.|||:.||:|||||:|.
  Fly    81 GGNGSSGNGNGNNNNGNGNNNNSMQQQDQHLDKNKQKRHRTRFTPAQLNELERCFSKTHYPDIFM 145

  Fly   115 REELAMKIGLTEARIQVWFQNRRAKWRKQEKVGP---------QSHPYNPYLPGGAATMQTVVGA 170
            |||:||:|||||:|:|||||||||||:|::|...         .||...|:   ||......:|.
  Fly   146 REEIAMRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRTPGALLPSHGLPPF---GANITNIAMGD 207

  Fly   171 AL-------------PPNPFTHLGF-QLRKPFDAQHAAN------------LAAFRYPHLSAAPM 209
            .|             ..||.| .|| ||.:......:.|            |.|..|.|      
  Fly   208 GLCGTGMFGGDRWSVGVNPMT-AGFGQLNQSSPLSSSLNSGLNSGINMGSALGAGSYQH------ 265

  Fly   210 IPSGYFNQFQRAPPHMLPHGMAGMYSPSSSFQSLLANMTAVPRGTPLGKPPALLVGSPDLHS--- 271
                              :|:..: ..|..:|..:..::..|.|:|....|      |:::|   
  Fly   266 ------------------YGLNAL-GDSMMYQHSVGGVSCGPSGSPSATTP------PNMNSCSS 305

  Fly   272 --PNHMLASPPTS-------PASGHASQ------------HQQHPTAHPPPPQAPPQMPVGVQ-P 314
              |..:.|.|.:|       |...|..|            ||.||.|.|.|.|...|:|..:| |
  Fly   306 VTPPPLSAQPNSSQNELNGEPMPLHQQQQQQTHQHQQQQTHQHHPMAPPTPTQQQQQLPQSMQSP 370

  Fly   315 AQLSPQHLVGI-ALTQQASSLS 335
            :..:...|..| ||.::||.|:
  Fly   371 SDGANDTLHSIAALRRRASELN 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeodomain 86..142 CDD:459649 40/55 (73%)
OAR 374..391 CDD:461067
otpNP_001286654.1 Homeodomain 117..168 CDD:459649 35/50 (70%)
Blue background indicates that the domain is not in the aligned region.

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