Protein Alignment al and prd

DIOPT Version :10

• Sequence 1: NP_722629.1
• Gene: al / 33208
• FlyBaseID: FBgn0000061
• Length: 408
• Species: Drosophila melanogaster
• Sequence 2: NP_723721.1
• Gene: prd / 34629
• FlyBaseID: FBgn0003145
• Length: 613
• Species: Drosophila melanogaster
• Alignment Length: 473
• Identity: 147/473 - (31%)
• Similarity: 195/473 - (41%)
• Gaps: 132/473 - (27%)

  Fly     4 SEEIKLEELPQEAKLAHPDAVVLVDR--APGSSAAS-----AGAALTVSMSVSGGAPSG-ASGAS 60
            |.||: |:|.:|.         :.||  ||..||.|     ..|.|...||.:.|:|:| .:.||
  Fly   122 SWEIR-EKLIREG---------VCDRSTAPSVSAISRLVRGRDAPLDNDMSSASGSPAGDGTKAS 176

  Fly    61 GGTNSPVSDGN-----------SDCEADE-YAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVF 113
            ....|.||.|:           ||||::. .|.||||||.||||::.||:|||:||.||.|||::
  Fly   177 SSCGSDVSGGHHNNGKPSDEDISDCESEPGIALKRKQRRCRTTFSASQLDELERAFERTQYPDIY 241

  Fly   114 TREELAMKIGLTEARIQVWFQNRRAKWRKQEKVGPQSHPYNPYLPGGAATMQTVVGA-------- 170
            ||||||.:..||||||||||.||||:.|||..      ..:...|||||...:.|.|
  Fly   242 TREELAQRTNLTEARIQVWFSNRRARLRKQHT------SVSGGAPGGAAASVSHVAASSSLPSVV 300

  Fly   171 ---------ALPP---NPFTHLGFQLRKPFDAQHAANLAAFRYPHLSAAPMIPSGYFNQFQRAPP 223
                     |:.|   :|.|  .:|.:..|...| ||::.     .:||||..|.........||
  Fly   301 SSVPSMAPLAMMPGSLDPAT--VYQQQYDFYGSH-ANISV-----SAAAPMASSNLSPGITTTPP 357

  Fly   224 HMLPHGMAGMYSPSSSFQSLL---ANMTAVPRGTPLGKPPALLVGS------------PDLHSPN 273
            |   |..  .|:||::..|.:   .|....|.|..:.......:||            |...|||
  Fly   358 H---HHQ--FYNPSANTASYIMPGENGNTTPTGNIIVSSYETQLGSVYGTETETHQTMPRNESPN 417

  Fly   274 HMLAS-----PPT-----SPASGHASQHQQHPTAHPPPPQAPPQMPVG---------VQPAQL-- 317
            ..::|     |||     :..||..........:...|.|:......|         |:...|
  Fly   418 ESVSSAFGQLPPTPNSLSAVVSGAGVTSSSGANSGADPSQSLANASAGSEELSAALKVESVDLIA 482

  Fly   318 -SPQHLVGIALTQQA----------SSLSPTQTSPVALTLS---------HSPQ-RQLPPP---- 357
             |...|.|...:.||          .||:.|.::..||.::         |:|| ...|.|
  Fly   483 ASQSQLYGGWSSMQALRPNAPLSPEDSLNSTSSTSQALDVTAHQMFHPYQHTPQYASYPAPGHAH 547

  Fly   358 SHQAPP--PPPRAATPPE 373
            ||...|  |.|.|...|:
  Fly   548 SHHGHPHAPHPHAHPHPQ 565

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
al	NP_722629.1	Homeodomain	86..142	CDD:459649	38/55 (69%)
		OAR	374..391	CDD:461067	147/473 (31%)
prd	NP_723721.1	PAX	27..154	CDD:238076	13/41 (32%)
		Homeodomain	214..270	CDD:459649	38/55 (69%)