DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment al and VSX2

DIOPT Version :10

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_878314.1 Gene:VSX2 / 338917 HGNCID:1975 Length:361 Species:Homo sapiens


Alignment Length:356 Identity:111/356 - (31%)
Similarity:138/356 - (38%) Gaps:86/356 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GISEEIKLEELPQEAKLAHPDAVVLVDRAPGSSAASAGAALTVSMSVSGG----APSGASG---- 58
            ||.|.:.|.:.|..   :||.| .|...|||...|   |...:|.:..||    .|.|..|    
Human    33 GIQEILGLNKEPPS---SHPRA-ALDGLAPGHLLA---ARSVLSPAGVGGMGLLGPGGLPGFYTQ 90

  Fly    59 --------------------ASG--GTNSPVSDGNSDCEADE---------YAPKRKQRRYRTTF 92
                                |||  .|:...|..:.|..:.:         ...|||:||:||.|
Human    91 PTFLEVLSDPQSVHLQPLGRASGPLDTSQTASSDSEDVSSSDRKMSKSALNQTKKRKKRRHRTIF 155

  Fly    93 TSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQEKVGPQSHPYNPYL 157
            ||:|||||||||:..|||||:.||.||||..|.|.|||||||||||||||:||...:|.....|.
Human   156 TSYQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAEYG 220

  Fly   158 PGGAATMQTVVGAALPPNPFTHLGFQLRKPFDA-------QHAANLAAF----RYP--HLSAAPM 209
            ..||....::      |.|.:.|........|:       .|..:|.|.    |.|  ...|.|.
Human   221 LYGAMVRHSI------PLPESILKSAKDGIMDSCAPWLLGMHKKSLEAAAESGRKPEGERQALPK 279

  Fly   210 IPSGYFNQFQRAPPHMLPHGMAGMYSPSSSFQSLLANMTAVPRGTPLGKPPALL--VGSPDLHSP 272
            :..  ..|.:|.|.          ...:.|.:.|..|..||.|.........:|  |..||    
Human   280 LDK--MEQDERGPD----------AQAAISQEELRENSIAVLRAKAQEHSTKVLGTVSGPD---- 328

  Fly   273 NHMLASPPTSPASGHASQHQQHPTAHPPPPQ 303
              .||.....|....| ..:..|.....|||
Human   329 --SLARSTEKPEEEEA-MDEDRPAERLSPPQ 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeodomain 86..142 CDD:459649 42/55 (76%)
OAR 374..391 CDD:461067
VSX2NP_878314.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 104..151 10/46 (22%)
Homeodomain 153..205 CDD:459649 39/51 (76%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 262..300 9/49 (18%)
OAR 300..318 CDD:461067 5/17 (29%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 304..317 4/12 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 313..361 12/51 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.