DRSC/TRiP Functional Genomics Resources

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Protein Alignment al and gsc

DIOPT Version :10

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_571092.1 Gene:gsc / 30212 ZFINID:ZDB-GENE-980528-2060 Length:240 Species:Danio rerio


Alignment Length:121 Identity:47/121 - (38%)
Similarity:64/121 - (52%) Gaps:11/121 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 ASAGAALTVSMSVSGGAPSGASGASGGTNSPVSD-----------GNSDCEADEYAPKRKQRRYR 89
            |..||..|:........|:|...|.....|||..           ..::.:.......|::||:|
Zfish    86 ACCGAIPTLGSQQCPCIPTGYDSAGSVLISPVPHQMMSYMNVGTLSRTELQLLNQLHCRRKRRHR 150

  Fly    90 TTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQEK 145
            |.||..|||.||..|..|.||||.|||:||.|:.|.|.:::|||:|||||||:|::
Zfish   151 TIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRRQKR 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeodomain 86..142 CDD:459649 34/55 (62%)
OAR 374..391 CDD:461067
gscNP_571092.1 Homeodomain 147..203 CDD:459649 34/55 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 199..240 5/8 (63%)
Blue background indicates that the domain is not in the aligned region.

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