DRSC/TRiP Functional Genomics Resources

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Protein Alignment al and pitx2

DIOPT Version :10

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_571050.1 Gene:pitx2 / 30164 ZFINID:ZDB-GENE-990714-27 Length:314 Species:Danio rerio


Alignment Length:355 Identity:97/355 - (27%)
Similarity:140/355 - (39%) Gaps:147/355 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 TNSPVS----DGNSDCE--ADEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMK 121
            |:||.|    .|.|..|  .|:.:.|::|||.||.|||.||:|||..|.|..|||:.||||:|:.
Zfish    54 TSSPESVEKEKGQSKNEDSNDDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVW 118

  Fly   122 IGLTEARIQVWFQNRRAKWRKQEK----------VGPQ----SHPYNPYLPGGAATMQTVVGAAL 172
            ..|||||::|||:||||||||:|:          .|||    ..||:...|.             
Zfish   119 TNLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQPYDDMYPS------------- 170

  Fly   173 PPNPFTHLGFQLRKPFDAQHAANLAAFRYPHLSAAPMIPSGYFNQFQRAPPHMLPHGMAGMYSPS 237
                :|:..:..:    ...:|:|:...:|           :||..     ::.|.....|:||.
Zfish   171 ----YTYNNWAAK----GLTSASLSTKSFP-----------FFNSM-----NVNPLSSQTMFSPP 211

  Fly   238 SSFQSLLANMTAVPRGTPLGKPPALLVGSP--DLHSPNHM--LASPPTSPASGHASQHQQHPTAH 298
            :|..|:..:.:.|         |:.:.|.|  .|:|.|::  |::|         |.:...||  
Zfish   212 NSISSMSMSSSMV---------PSAVTGVPGSSLNSLNNLNNLSNP---------SLNSGVPT-- 256

  Fly   299 PPPPQAPPQMPVGVQPAQLSPQHLVGIALTQQASSLSPTQTSPVALTLSHSPQRQLPPPSHQAPP 363
            |..|.|||                                                         
Zfish   257 PACPYAPP--------------------------------------------------------- 264

  Fly   364 PPPRAATPP---EDRRTSSIAALRLKAREH 390
                  |||   .|...||:|:|||||::|
Zfish   265 ------TPPYVYRDTCNSSLASLRLKAKQH 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeodomain 86..142 CDD:459649 36/55 (65%)
OAR 374..391 CDD:461067 10/17 (59%)
pitx2NP_571050.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..93 17/38 (45%)
Homeodomain 83..139 CDD:459649 36/55 (65%)
OAR 272..289 CDD:461067 10/17 (59%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 276..289 9/13 (69%)
Nuclear localization signal. /evidence=ECO:0000255 282..286 3/3 (100%)

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