DRSC/TRiP Functional Genomics Resources

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Protein Alignment al and mixl1

DIOPT Version :10

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_571015.3 Gene:mixl1 / 30115 ZFINID:ZDB-GENE-000208-20 Length:327 Species:Danio rerio


Alignment Length:314 Identity:81/314 - (25%)
Similarity:109/314 - (34%) Gaps:118/314 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 RRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQEKVGPQS 150
            ||.||.||..|::.|||.:..|.|||::.||:|....||.|:||||||||||||.|:|.      
Zfish    59 RRKRTNFTQQQIDVLEKVYLDTKYPDIYLREKLEALTGLPESRIQVWFQNRRAKSRRQV------ 117

  Fly   151 HPYNPYLPGGAATMQTVVGAALPPNPFTHLGFQLRKPFDAQHAANLAAFRYPHLSAAPMIPSGYF 215
                     |.:......|..|.||                   ||                 ..
Zfish   118 ---------GISIPNKTSGNILTPN-------------------NL-----------------LM 137

  Fly   216 NQFQRAPPHMLPHGMAGMYSPSS----SFQSLLANMTAVPRGTPLGKPPALLVGSPDLHSP---- 272
            :||   ..|....|:..:...|:    ||...|.|.:.....|..|          |::.|    
Zfish   138 HQF---TTHQNHSGLENLQRTSTFTADSFHQQLINSSEEKISTIKG----------DIYDPTTIP 189

  Fly   273 -------------NHMLASPPTSPASGHASQHQQ--HPTAH---------------PPPPQAPPQ 307
                         :|:....|.|....:..:|:|  |...|               ||.....|:
Zfish   190 CMFSRTQENPIKTDHLSVVVPRSYTQQYPKEHEQFTHSANHAKSTMKQFLVEYDNFPPNKTIGPE 254

  Fly   308 MPVGVQP---------AQLSPQHLVGIALTQQASSLSPTQTSPVALTLSHSPQR 352
            |.|.:.|         :..||:|   ||.:.|..|:   ||.| .|..:.||.|
Zfish   255 MKVVIPPLPSQSNFMMSSSSPKH---IACSVQNMSV---QTQP-ELFATFSPIR 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeodomain 86..142 CDD:459649 32/55 (58%)
OAR 374..391 CDD:461067
mixl1NP_571015.3 Homeodomain 59..115 CDD:459649 32/55 (58%)
Blue background indicates that the domain is not in the aligned region.

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