DRSC/TRiP Functional Genomics Resources

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Protein Alignment al and Prrx1

DIOPT Version :10

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_722543.1 Gene:Prrx1 / 266813 RGDID:628884 Length:245 Species:Rattus norvegicus


Alignment Length:191 Identity:70/191 - (36%)
Similarity:94/191 - (49%) Gaps:28/191 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ISEEIKLEELPQEAKLAHPDAVVLVDRAPGSSAASAGAALTVSMSVSGGAPSGASGASGGTNSPV 67
            :|..:.|||           |..:|......|...||.:|..|           .|.:.|:::|.
  Rat    36 VSHLLDLEE-----------AGDMVAAQADESVGEAGRSLLES-----------PGLTSGSDTPQ 78

  Fly    68 SDGNSDCEADEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVW 132
            .| |....::| ..||||||.||||.|.||:.||:.|.||||||.|.||:||.::.|||||:|||
  Rat    79 QD-NDQLNSEE-KKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVW 141

  Fly   133 FQNRRAKWRKQEK---VGPQSHPYNPYLPGGAATMQTVVGAALPPNPFTHLGFQLRKPFDA 190
            |||||||:|:.|:   ....:.....|.....|..|.:|... .|.|..:|.:....|:.|
  Rat   142 FQNRRAKFRRNERAMLANKNASLLKSYSGDVTAVEQPIVPRP-APRPTDYLSWGTASPYSA 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeodomain 86..142 CDD:459649 38/55 (69%)
OAR 374..391 CDD:461067
Prrx1NP_722543.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 54..103 21/61 (34%)
Homeodomain 99..151 CDD:459649 35/51 (69%)
OAR 219..235 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 222..235
Blue background indicates that the domain is not in the aligned region.

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