DRSC/TRiP Functional Genomics Resources

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Protein Alignment al and Pitx2

DIOPT Version :10

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_001035967.1 Gene:Pitx2 / 18741 MGIID:109340 Length:324 Species:Mus musculus


Alignment Length:416 Identity:111/416 - (26%)
Similarity:155/416 - (37%) Gaps:162/416 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LPQEAKLA-------------HPDAVVLVD-RAPGS--SAASAGAALTVSMSVSGGAPSGASGAS 60
            ||.|.:.|             ||.|:.:.. .|||.  |..|:...|.|.......:|..|....
Mouse     8 LPLEHRAAGTKLSAASSPFCHHPQALAMASVLAPGQPRSLDSSKHRLEVHTISDTSSPEVAEKDK 72

  Fly    61 GGTNSPVSDGNSDCEADEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLT 125
            |....     |.|..|::.:.|::|||.||.|||.||:|||..|.|..|||:.||||:|:...||
Mouse    73 GQQGK-----NEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLT 132

  Fly   126 EARIQVWFQNRRAKWRKQEK----------VGPQ----SHPYNPYLPGGAATMQTVVGAALPPNP 176
            |||::|||:||||||||:|:          .|||    ..||:...||.:.......|..     
Mouse   133 EARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQPYDDMYPGYSYNNWAAKGLT----- 192

  Fly   177 FTHLGFQLRKPFDAQHAANLAAFRYPHLSAAPMIPSGYFNQFQRAPPHMLPHGMAGMYSPSSSFQ 241
                            :|:|:...:|           :||..     ::.|.....|:||.:|..
Mouse   193 ----------------SASLSTKSFP-----------FFNSM-----NVNPLSSQSMFSPPNSIS 225

  Fly   242 SLLANMTAVPRGTPLGKPPALLVGSP--DLHSPNHM--LASPPTSPASGHASQHQQHPTAHPPPP 302
            |:..:.:.|         |:.:.|.|  .|:|.|::  |:||..:.|.         ||  |..|
Mouse   226 SMSMSSSMV---------PSAVTGVPGSSLNSLNNLNNLSSPSLNSAV---------PT--PACP 270

  Fly   303 QAPPQMPVGVQPAQLSPQHLVGIALTQQASSLSPTQTSPVALTLSHSPQRQLPPPSHQAPPPPPR 367
            .|||                                                             
Mouse   271 YAPP------------------------------------------------------------- 274

  Fly   368 AATPP---EDRRTSSIAALRLKAREH 390
              |||   .|...||:|:|||||::|
Mouse   275 --TPPYVYRDTCNSSLASLRLKAKQH 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeodomain 86..142 CDD:459649 36/55 (65%)
OAR 374..391 CDD:461067 10/17 (59%)
Pitx2NP_001035967.1 Homeodomain 93..149 CDD:459649 36/55 (65%)
OAR 282..299 CDD:461067 10/17 (59%)

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