DRSC/TRiP Functional Genomics Resources

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Protein Alignment al and Pax7

DIOPT Version :9

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:XP_006538692.1 Gene:Pax7 / 18509 MGIID:97491 Length:505 Species:Mus musculus


Alignment Length:377 Identity:118/377 - (31%)
Similarity:155/377 - (41%) Gaps:94/377 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 APSGASGASGGTNSPVSDGNSDCEADEYAP-KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTR 115
            |.....|..|...:.:.:| ||.|::...| ||||||.|||||:.|||||||||.||||||::||
Mouse   184 AKHSIDGILGDKGNRLDEG-SDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTR 247

  Fly   116 EELAMKIGLTEARIQVWFQNRRAKWRKQEKVGPQSHPYNPYLPGG--AATMQTVVGAALPPN--P 176
            ||||.:..|||||:||||.||||:||||.... |...:|..||||  ...|.|:....||.:  |
Mouse   248 EELAQRTKLTEARVQVWFSNRRARWRKQAGAN-QLAAFNHLLPGGFPPTGMPTLPPYQLPDSTYP 311

  Fly   177 FTHL----GFQLRKPF----DAQHAANLAAFRYPHLSAAPMIPSGYFNQFQRAPPHMLPHGMAGM 233
            .|.:    |..:.:|.    ...|...|||     .:||....|.|                 |.
Mouse   312 TTTISQDGGSTVHRPQPLPPSTMHQGGLAA-----AAAAADTSSAY-----------------GA 354

  Fly   234 YSPSSSFQSLLANMTAVPRGTPLGKPPALLVGSPDLHSPNHMLASPPTSPASGHASQHQQHPTAH 298
            ....||:.....|                 .|:|.    |||  :|.::..|........:|:|.
Mouse   355 RHSFSSYSDSFMN-----------------PGAPS----NHM--NPVSNGLSPQVMSILSNPSAV 396

  Fly   299 PPPPQAPPQMPVGVQPAQLSPQH-------LVGIALTQQASSLSPTQTSPVALTLSHSPQRQLPP 356
            ||.|||         ...:||.|       .:..:.:|:|.|:.|..:.|.:       |...||
Mouse   397 PPQPQA---------DFSISPLHGGLDSASSISASCSQRADSIKPGDSLPTS-------QSYCPP 445

  Fly   357 ----PSHQAPPPP-------PRAATPPEDRRTSSIAALRLKAREHELKLELL 397
                ..:...|..       .:.|.....:..|.....|:|..||...|.||
Mouse   446 TYSTTGYSVDPVAGYQYSQYGQTAVDYLAKNVSLSTQRRMKLGEHSAVLGLL 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeobox 89..141 CDD:278475 39/51 (76%)
OAR 374..391 CDD:281777 4/16 (25%)
Pax7XP_006538692.1 PAX 34..161 CDD:128645
Homeobox 220..274 CDD:365835 40/53 (75%)
Pax7 347..385 CDD:372070 13/77 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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