DRSC/TRiP Functional Genomics Resources

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Protein Alignment al and npax-1

DIOPT Version :10

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_495533.2 Gene:npax-1 / 184779 WormBaseID:WBGene00017664 Length:176 Species:Caenorhabditis elegans


Alignment Length:96 Identity:22/96 - (22%)
Similarity:34/96 - (35%) Gaps:33/96 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 PDLHSPNHMLASPPTSPASGHASQHQQHPTAHPPPPQAPPQMPVGVQPAQLSPQHLVGIALTQQA 331
            |.:|...|.       |.|.:.|      |..||....||         .:.|..|:....:..:
 Worm     3 PQIHQHTHF-------PVSTNGS------TGSPPNNTLPP---------PIIPYSLLSAFYSLSS 45

  Fly   332 SSLSPTQTSP--------VALTLSHSPQRQL 354
            :::|   |||        .|:..|::|.|.|
 Worm    46 ANIS---TSPEINEGEKVKAVGRSYNPGRPL 73

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeodomain 86..142 CDD:459649
OAR 374..391 CDD:461067
npax-1NP_495533.2 HTH_ARSR 60..>122 CDD:481197 5/14 (36%)
Blue background indicates that the domain is not in the aligned region.

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