DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment al and ceh-37

DIOPT Version :10

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_001360629.1 Gene:ceh-37 / 181530 WormBaseID:WBGene00000458 Length:292 Species:Caenorhabditis elegans


Alignment Length:262 Identity:74/262 - (28%)
Similarity:104/262 - (39%) Gaps:48/262 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 SGASGGTNSPVSDGNSDCEADEYAP--KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELA 119
            |.|:.|.|.||........|...|.  .||.||.|||::..|||.||..|:.|.|||||.||.:|
 Worm    25 STATTGFNYPVQPMTMFSGAPYNAAMIPRKNRRERTTYSRQQLEILETLFNETQYPDVFARERVA 89

  Fly   120 MKIGLTEARIQVWFQNRRAKWRKQEKVGP-------QSHPYNPY----------LPGGAATMQTV 167
            .:|.|.|:||||||:|||||:|.|||..|       |.|.....          |.||:...|..
 Worm    90 DQIRLQESRIQVWFKNRRAKYRLQEKQKPKRSNEKSQEHKSEDQQQTDVLDGEPLKGGSPGYQPQ 154

  Fly   168 VGAALPPNPFTHLGFQLRKPFDAQHAANLAAFRYPHLSAAPMIPSGYFNQFQRAPPHMLPHGMAG 232
            :.:.|..........:|..|.........|:....:.|||.:..:|             .|.:.|
 Worm   155 IKSELESCDGAVASGKLGTPKSISPVETTASTTSSNTSAAELQWNG-------------DHKILG 206

  Fly   233 MYSPSSSFQSLLANMTAVPRGTPLGKPPALLVGSPDLHSPNHMLASPPTSPASGHASQHQQHPTA 297
             :..:.:..|...:.||....||               |.:..:.:..:.|.:..:.....:|..
 Worm   207 -FGKNETTTSAAVSPTADNASTP---------------SSSSSITATSSLPTTSSSLSVYNYPAI 255

  Fly   298 HP 299
            :|
 Worm   256 YP 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeodomain 86..142 CDD:459649 34/55 (62%)
OAR 374..391 CDD:461067
ceh-37NP_001360629.1 Homeodomain 56..111 CDD:459649 34/54 (63%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.