DRSC/TRiP Functional Genomics Resources

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Protein Alignment al and ceh-17

DIOPT Version :10

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_491393.1 Gene:ceh-17 / 172059 WormBaseID:WBGene00000440 Length:237 Species:Caenorhabditis elegans


Alignment Length:106 Identity:59/106 - (55%)
Similarity:76/106 - (71%) Gaps:16/106 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 SMSVSGGAPS----GASGASGGTNSPVSDGNSDCEADEYAPKRKQRRYRTTFTSFQLEELEKAFS 105
            |.:|..|.|.    ||..::||  :|::.          |.:|||||.||||||.||:|||::|.
 Worm   117 SSNVLNGLPRSSLVGALCSTGG--APLNP----------AERRKQRRIRTTFTSGQLKELERSFC 169

  Fly   106 RTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQEKV 146
            .|||||::||||:||:|.|||||:||||||||||:|||||:
 Worm   170 ETHYPDIYTREEIAMRIDLTEARVQVWFQNRRAKYRKQEKI 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeodomain 86..142 CDD:459649 41/55 (75%)
OAR 374..391 CDD:461067
ceh-17NP_491393.1 DLL_N 19..112 CDD:463567
Homeodomain 150..206 CDD:459649 41/55 (75%)
Blue background indicates that the domain is not in the aligned region.

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