DRSC/TRiP Functional Genomics Resources

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Protein Alignment al and RHOXF1

DIOPT Version :9

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:XP_011529583.1 Gene:RHOXF1 / 158800 HGNCID:29993 Length:212 Species:Homo sapiens


Alignment Length:147 Identity:48/147 - (32%)
Similarity:70/147 - (47%) Gaps:8/147 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EIKLEELPQEAKLAHPDAVVLVDRAP---GSSAASAGAALTVSMSVSGG-APSGASGASGGTNSP 66
            ::|:...||....:..:..| ...||   |:.....|......|:..|| .|.|..|.......|
Human    46 QVKISPTPQLGAASSAEGHV-GQGAPGLMGNMNPEGGVNHENGMNRDGGMIPEGGGGNQEPRQQP 109

  Fly    67 VSDGNSDCEADEYAPK---RKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEAR 128
            ........:|....|:   .:.|..||.||..|:||||..|..|.||||.||.|||..:|:||.:
Human   110 QPPPEEPAQAAMEGPQPENMQPRTRRTKFTLLQVEELESVFRHTQYPDVPTRRELAENLGVTEDK 174

  Fly   129 IQVWFQNRRAKWRKQEK 145
            ::|||:|:||:.|:.::
Human   175 VRVWFKNKRARCRRHQR 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeobox 89..141 CDD:278475 29/51 (57%)
OAR 374..391 CDD:281777
RHOXF1XP_011529583.1 homeodomain 132..190 CDD:238039 31/57 (54%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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