DRSC/TRiP Functional Genomics Resources

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Protein Alignment al and hbn

DIOPT Version :10

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:XP_315326.5 Gene:hbn / 1276025 VectorBaseID:AGAMI1_011839 Length:349 Species:Anopheles gambiae


Alignment Length:389 Identity:111/389 - (28%)
Similarity:153/389 - (39%) Gaps:132/389 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PQEAKLAHPDAVVLVDRAPG--------SSAASAGAALTVSMSVSGGAPSGASGASGGTNSPVSD 69
            ||.:.:..|.||..:|:..|        |...:...:||::.:.:.......|....|:...|.|
Mosquito    19 PQSSAITKPRAVYSIDQILGNHHHTRRTSGPNNNNNSLTINNNNNSSPDHENSLKREGSPVEVHD 83

  Fly    70 GNSDCEADEYAP-----------------KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREE 117
            ...|.:.|:..|                 .||.||.|||||::||.:||:||.:|.|||||||||
Mosquito    84 NGVDVDNDDELPIMGDIDPMDNDPNDMGRPRKIRRSRTTFTTYQLHQLERAFEKTQYPDVFTREE 148

  Fly   118 LAMKIGLTEARIQVWFQNRRAKWRKQEK-VGPQSHPY------NPYLPGGAATMQTVVGAALPPN 175
            |||::.|:|||:|||||||||||||:|| :|..:..:      .|..|           .||   
Mosquito   149 LAMRLDLSEARVQVWFQNRRAKWRKREKAMGRDTSAFLHHEQGMPEFP-----------LAL--- 199

  Fly   176 PFTHLGFQLRKPFDAQHAANLAAFRYPHLSAAPMIPSGYFNQFQRAPPHMLPHGMAGMYSPSSSF 240
            |.||                    ..||    |.:|:.::      ||:                
Mosquito   200 PLTH--------------------NIPH----PALPTEFW------PPN---------------- 218

  Fly   241 QSLLANMTAVPRGTPLGKPPALLVGSPDLHSPNHMLASPPTSPASGHA--SQHQ-------QHP- 295
                           .|..|:||.|:..|..||.|   |.....:.||  ||:.       .:| 
Mosquito   219 ---------------FGLHPSLLPGAHGLLHPNVM---PNYKIPNFHAILSQYMGLNNLFGGYPQ 265

  Fly   296 ----TAHPPPPQAPPQMPVGVQPAQLSPQHLVGIALTQQ------ASSLSPTQTSPVALTLSHS 349
                .....|..:|.|.|..|||..:...  |||..|..      ||.||.:.:|..:.:.|.|
Mosquito   266 NLSINTRISPQNSPKQSPTSVQPTMVGGP--VGINNTSNSSTNSGASILSSSNSSSSSSSSSSS 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeodomain 86..142 CDD:459649 41/55 (75%)
OAR 374..391 CDD:461067
hbnXP_315326.5 None
Blue background indicates that the domain is not in the aligned region.

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