DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment al and Arx

DIOPT Version :9

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_001292869.1 Gene:Arx / 11878 MGIID:1097716 Length:564 Species:Mus musculus


Alignment Length:422 Identity:140/422 - (33%)
Similarity:182/422 - (43%) Gaps:138/422 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EEIKLEELPQEAKLAHPDAVVLVDR------APGSSAASAGAALTVSMSVSGGA----------P 53
            ||..||:  .:.:|...||..|:..      |...:.|:|.||...:::..||.          |
Mouse   239 EEELLED--DDEELLEDDARALLKEPRRCSVATTGTVAAAAAAAAAAVATEGGELSPKEELLLHP 301

  Fly    54 SGASGASGGTNSPVSDGNSDCEADEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREEL 118
            ..|.|..|..:..:|.|:   :::|...|||||||||||||:||||||:||.:||||||||||||
Mouse   302 EDAEGKDGEDSVCLSAGS---DSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREEL 363

  Fly   119 AMKIGLTEARIQVWFQNRRAKWRKQEKVGPQSHPYNPYLPGGAATMQTVVGAALPPNPFTHLGFQ 183
            ||::.|||||:|||||||||||||:||.|.|:||.....||                        
Mouse   364 AMRLDLTEARVQVWFQNRRAKWRKREKAGAQTHPPGLPFPG------------------------ 404

  Fly   184 LRKPFDAQHAANLAAFRYPHLSAAPMIPSGYFNQFQRAPPHMLPHGMAGMYSPSSSFQSLLANMT 248
               |..|.|..:      |:|.|:|.            |||   |                    
Mouse   405 ---PLSATHPLS------PYLDASPF------------PPH---H-------------------- 425

  Fly   249 AVPRGTPLGKPPALLVGSPDLHSPNHMLASPPTSPASGHASQHQQHPTAHPPPPQA--PPQ-MPV 310
                       ||              |.|..|:.|:..|:   ..|:..|||..|  ||. .|:
Mouse   426 -----------PA--------------LDSAWTAAAAAAAA---AFPSLPPPPGSASLPPSGAPL 462

  Fly   311 GV----------QPAQLSPQHLVGIALTQQASSLSPTQTSPVALTLSHSPQRQLPPPSHQAPPPP 365
            |:          .||.:||      |..:..|:::|..::..|..|...|...:...........
Mouse   463 GLSTFLGAAVFRHPAFISP------AFGRLFSTMAPLTSASTAAALLRQPTPAVEGAVASGALAD 521

  Fly   366 PRAATPPEDRRTSSIAALRLKAREHELKLELL 397
            |  ||...|||.||||||||||:||..:|..|
Mouse   522 P--ATAAADRRASSIAALRLKAKEHAAQLTQL 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeobox 89..141 CDD:278475 43/51 (84%)
OAR 374..391 CDD:281777 14/16 (88%)
ArxNP_001292869.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 54..79
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..264 8/26 (31%)
Homeobox 334..386 CDD:278475 43/51 (84%)
OAR 528..545 CDD:281777 14/16 (88%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 532..545 11/12 (92%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 110 1.000 Domainoid score I6339
eggNOG 1 0.900 - - E33208_3BSUU
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D454642at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm42357
orthoMCL 1 0.900 - - OOG6_108797
Panther 1 1.100 - - O PTHR24329
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5874
SonicParanoid 1 1.000 - - X3639
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.850

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