DRSC/TRiP Functional Genomics Resources

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Protein Alignment al and sia2

DIOPT Version :10

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:XP_002942206.3 Gene:sia2 / 100489935 XenbaseID:XB-GENE-482070 Length:220 Species:Xenopus tropicalis


Alignment Length:92 Identity:33/92 - (35%)
Similarity:43/92 - (46%) Gaps:15/92 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 TNSPVSDGNS--------------DCEADEYAPKRKQR-RYRTTFTSFQLEELEKAFSRTHYPDV 112
            ||:.:|.|..              ..|.|.|.|..:.| |.||.::..|...|:..|....|||.
 Frog    92 TNNEISKGRKRPLYEEEQRESKKPKLEMDHYLPSARTRCRRRTIYSKEQTLFLQDQFDLNPYPDF 156

  Fly   113 FTREELAMKIGLTEARIQVWFQNRRAK 139
            .:|..:|...|:.|.|||||||||||:
 Frog   157 VSRCHIAKITGIPEPRIQVWFQNRRAR 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeodomain 86..142 CDD:459649 25/55 (45%)
OAR 374..391 CDD:461067
sia2XP_002942206.3 COG5576 69..>183 CDD:227863 32/90 (36%)
Homeodomain 131..184 CDD:459649 24/53 (45%)
Blue background indicates that the domain is not in the aligned region.

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