DRSC/TRiP Functional Genomics Resources

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Protein Alignment al and alx1

DIOPT Version :9

Sequence 1:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster
Sequence 2:XP_002931669.1 Gene:alx1 / 100489661 XenbaseID:XB-GENE-853095 Length:326 Species:Xenopus tropicalis


Alignment Length:438 Identity:115/438 - (26%)
Similarity:162/438 - (36%) Gaps:173/438 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ISEEIKLEELPQEAK---------LAH----PDAVVLVDRAPGSSAASAGAALTVS---MSVSGG 51
            ::|:..|:..|.:|.         |.|    .|.....:::|......|.:|:..:   :.:...
 Frog     4 LTEKFALKNQPSKASDFYMGAAGTLEHVMDSMDTDSFYNKSPAGKCVQAFSAIQRAEHHVRMERA 68

  Fly    52 APSGASGASGG--------------------TNSPVSDGNS---DCEADEYAPK-------RKQR 86
            :|...:.||.|                    .:..||.|.:   ..:.||...|       .|:|
 Frog    69 SPCQDTNASYGLAKVEGQAVHTELGRPMETCCSLAVSPGKAMADKVDLDELGDKCDSNVSSSKKR 133

  Fly    87 RYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQEKVG---- 147
            |:||||||.|||||||.|.:||||||:.||:||::..|||||:|||||||||||||:|:.|    
 Frog   134 RHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKWRKRERYGQIQQ 198

  Fly   148 PQSHPYNPYLPGGAATMQTVVGAALPPNPFTHLGFQLRKPFDAQHAANLAAFRYPHLSAAPMIPS 212
            .:||        .|||....|                                .|...:.|.|.:
 Frog   199 AKSH--------FAATYDISV--------------------------------LPRADSYPQIQN 223

  Fly   213 GYFNQFQRAPPHMLPHGMAGMYSPSSSFQSLLANMTAVPRGTPLGKPPALLVGSPDLHSPNHMLA 277
            ..:               ||..|..|...|.:     :||     :|.|.:  :|..||..  ..
 Frog   224 NLW---------------AGNPSGGSVVTSCM-----LPR-----EPSACM--TPYSHSTR--TD 259

  Fly   278 SPPTSPASGHASQHQQHPTAHPPPPQAPPQMPVGVQPAQLSPQHLVGIALTQQASSLSPTQTSPV 342
            ||.|| .:.|.:|.     :|.|                      :....|:...|.|..     
 Frog   260 SPYTS-FTNHQNQF-----SHVP----------------------LNNFFTESLLSGSAN----- 291

  Fly   343 ALTLSHSPQRQLPPPSHQAPPPPPRAATPPEDRRTSSIAALRLKAREH 390
                .||.:                 |.|..:||:||||.||:||:||
 Frog   292 ----GHSFE-----------------AKPEFERRSSSIAVLRMKAKEH 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alNP_722629.1 Homeobox 89..141 CDD:278475 39/51 (76%)
OAR 374..391 CDD:281777 12/17 (71%)
alx1XP_002931669.1 Homeobox 135..189 CDD:365835 40/53 (75%)
OAR 302..320 CDD:367680 12/17 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D454642at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5874
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.040

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